RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ALDH1A3P47895 512 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 HNRNPDQ14103 355 aaKnown RBP15.58■□□□□ 0.08
SCARF1-203ENST00000434376 CAPRIN1Q14444 709 aaKnown RBP15.58■□□□□ 0.08
SCARF1-203ENST00000434376 POTEHQ6S545 545 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 PAQR3Q6TCH7 311 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 CUZD1Q86UP6 607 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 LCA5Q86VQ0 697 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 LSMEM2Q8N112 164 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 ITFG2Q969R8 447 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 EGFL7Q9UHF1 273 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 FKBPLQ9UIM3 349 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 RAP2CQ9Y3L5 183 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 F5P12259 2224 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 KRT87PA6NCN2 255 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 SLC38A8A6NNN8 435 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 CD3EAPO15446 510 aaKnown RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 C1RP00736 705 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 SELPP16109 830 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 RHOQP17081 205 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 AIF1P55008 147 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 SMAD3P84022 425 aaKnown RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 CYP4F8P98187 520 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 ZNF177Q13360 481 aaPredicted RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 TSNQ15631 228 aaKnown RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 TRIM71Q2Q1W2 868 aaKnown RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 C18orf21Q32NC0 220 aaPredicted RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 NADK2Q4G0N4 442 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 LZTR1Q8N653 840 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 TUBGCP3Q96CW5 907 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 MARCH5Q9NX47 278 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 SCML2Q9UQR0 700 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 COPG1Q9Y678 874 aaKnown RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 WDR87Q6ZQQ6 2873 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 CDC7O00311 574 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 BTN3A1O00481 513 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 ZNF195O14628 629 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 SEC24AO95486 1093 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 PSMC3P17980 439 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 MYBPC3Q14896 1274 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 TLR1Q15399 786 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 AGAP9Q5VTM2 703 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 EPGNQ6UW88 154 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 BHLHE22Q8NFJ8 381 aaPredicted RBP15.57■□□□□ 0.08
SCARF1-203ENST00000434376 ATP6V1E2Q96A05 226 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 PTERQ96BW5 349 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 HIPK3Q9H422 1215 aa15.57■□□□□ 0.08
SCARF1-203ENST00000434376 E5RI56 91 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 COCHO43405 550 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 PRAMEF12O95522 483 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 PRKAA1Q13131 559 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 OTOP2Q7RTS6 562 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 DDI1Q8WTU0 396 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 NSMCE3Q96MG7 304 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 GPR21Q99679 349 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 FAF1Q9UNN5 650 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-203ENST00000434376 MATN2O00339 956 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 CABYRO75952 493 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 ASLP04424 464 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 LTA4HP09960 611 aaKnown RBP15.56■□□□□ 0.08
SCARF1-203ENST00000434376 TYMPP19971 482 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 TPP2P29144 1249 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-203ENST00000434376 CPOXP36551 454 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 GNA12Q03113 381 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 TMCO4Q5TGY1 634 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 CCSAPQ6IQ19 270 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-203ENST00000434376 CAMK1DQ8IU85 385 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 DCUN1D1Q96GG9 259 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 C1QTNF1Q9BXJ1 281 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 WDR41Q9HAD4 459 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 SCUBE2Q9NQ36 999 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 AURKCQ9UQB9 309 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 SCN10AQ9Y5Y9 1956 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 A0A1W2PQ67 120 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 UNCXA6NJT0 531 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 TBL1XO60907 577 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 TRIM16O95361 564 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 UGT1A6P19224 532 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 UGT1A1P22309 533 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 UGT1A4P22310 534 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 PRDX3P30048 256 aaKnown RBP15.56■□□□□ 0.08
SCARF1-203ENST00000434376 UGT1A3P35503 534 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 UGT1A5P35504 534 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 DSC1Q08554 894 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 KLHDC10Q6PID8 442 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 KDELC1Q6UW63 502 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 FAM151BQ6UXP7 276 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 AMIGO2Q86SJ2 522 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 CILP2Q8IUL8 1156 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 TRIML2Q8N7C3 387 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 SIDT2Q8NBJ9 832 aaKnown RBP15.56■□□□□ 0.08
SCARF1-203ENST00000434376 STYXQ8WUJ0 223 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 IMP4Q96G21 291 aaKnown RBP15.56■□□□□ 0.08
SCARF1-203ENST00000434376 UBA2Q9UBT2 640 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-203ENST00000434376 TRIOO75962 3097 aa15.56■□□□□ 0.08
SCARF1-203ENST00000434376 NPEPPSL1A6NEC2 478 aa15.55■□□□□ 0.08
SCARF1-203ENST00000434376 OAZ2O95190 189 aa15.55■□□□□ 0.08
SCARF1-203ENST00000434376 IGLV3-25P01717 112 aa15.55■□□□□ 0.08
SCARF1-203ENST00000434376 INSCQ1MX18 579 aa15.55■□□□□ 0.08
SCARF1-203ENST00000434376 MAP7D1Q3KQU3 841 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms