RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 KLF16Q9BXK1 252 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-209ENST00000433949 SMG9Q9H0W8 520 aaKnown RBP11.95□□□□□ -0.5
CTCFL-209ENST00000433949 POMKQ9H5K3 350 aa11.95□□□□□ -0.5
CTCFL-209ENST00000433949 PIDD1Q9HB75 910 aa11.95□□□□□ -0.5
CTCFL-209ENST00000433949 ASAH2Q9NR71 780 aa11.95□□□□□ -0.5
CTCFL-209ENST00000433949 CATSPERZQ9NTU4 200 aa11.95□□□□□ -0.5
CTCFL-209ENST00000433949 INTS10Q9NVR2 710 aaKnown RBP11.95□□□□□ -0.5
CTCFL-209ENST00000433949 DNMT3BQ9UBC3 853 aaKnown RBP11.95□□□□□ -0.5
CTCFL-209ENST00000433949 CDYLQ9Y232 598 aa11.95□□□□□ -0.5
CTCFL-209ENST00000433949 VPS9D1Q9Y2B5 631 aa11.95□□□□□ -0.5
CTCFL-209ENST00000433949 TTC24A2A3L6 582 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 DCXO43602 365 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 WISP3O95389 354 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 GOT2P00505 430 aaKnown RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 F11P03951 625 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 KLKB1P03952 638 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 IRF1P10914 325 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 GCKP35557 465 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 SATB1Q01826 763 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 TAF1AQ15573 450 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 KHDC1Q4VXA5 237 aaKnown RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 PABPC1LQ4VXU2 614 aaKnown RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 ACSBG2Q5FVE4 666 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 ZNF789Q5FWF6 425 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 TRIM67Q6ZTA4 783 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 ARL14EPQ8N8R7 260 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 TXNDC5Q8NBS9 432 aaKnown RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 MAPK15Q8TD08 544 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 ING5Q8WYH8 240 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 DNAJC1Q96KC8 554 aaKnown RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 TCF12Q99081 682 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 THTPAQ9BU02 230 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 IL21Q9HBE4 155 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 NLE1Q9NVX2 485 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 NKX1-2Q9UD57 310 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 ZDHHC2Q9UIJ5 367 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 AGO1Q9UL18 857 aaKnown RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 ARHGAP26Q9UNA1 814 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 ARL5AQ9Y689 179 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 C2orf81A6NN90 581 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 E9PBE3 544 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 PFDN6O15212 129 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 KLHL41O60662 606 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 RHOP08100 348 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 THRAP10827 490 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 FDXRP22570 491 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 PSMA3P25788 255 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 PMLP29590 882 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 SCNN1BP51168 640 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 HYAL1Q12794 435 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 GALNT3Q14435 633 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 CBX2Q14781 532 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 NAA25Q14CX7 972 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 CCDC6Q16204 474 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 TYSND1Q2T9J0 566 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 RALGPS1Q5JS13 557 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 TMC8Q8IU68 726 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 LSMEM2Q8N112 164 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 CCNYL1Q8N7R7 359 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 OR52K2Q8NGK3 314 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 RMDN1Q96DB5 314 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 RTKNQ9BST9 563 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 TDRD1Q9BXT4 1180 aaKnown RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 ADGRE3Q9BY15 652 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 LMAN2LQ9H0V9 348 aa11.94□□□□□ -0.5
CTCFL-209ENST00000433949 STX18Q9P2W9 335 aaKnown RBP11.94□□□□□ -0.5
CTCFL-209ENST00000433949 CBX4O00257 560 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 GRID2O43424 1007 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 PSMG1O95456 288 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 C1RP00736 705 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 COX4I1P13073 169 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 HDCP19113 662 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 SUOXP51687 545 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 STC1P52823 247 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 PGGT1BP53609 377 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 ACTR3P61158 418 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 NFKB2Q00653 900 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 KLF10Q13118 480 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 SLC5A9Q2M3M2 681 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 LRIT3Q3SXY7 679 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 INO80DQ53TQ3 878 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-209ENST00000433949 SH2D4BQ5SQS7 431 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
CTCFL-209ENST00000433949 AFTPHQ6ULP2 937 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 GLT6D1Q7Z4J2 308 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 CPSF7Q8N684 471 aaKnown RBP11.93□□□□□ -0.5
CTCFL-209ENST00000433949 FBXO27Q8NI29 283 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 AGR3Q8TD06 166 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 ACTRT2Q8TDY3 377 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 CDKN2AIPNLQ96HQ2 116 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 ASB2Q96Q27 587 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 LRRC3Q9BY71 257 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 MUC3BQ9H195 1237 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 MARCH4Q9P2E8 410 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-209ENST00000433949 MCM8Q9UJA3 840 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 ASB3Q9Y575 518 aa11.93□□□□□ -0.5
CTCFL-209ENST00000433949 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.93□□□□□ -0.5
CTCFL-209ENST00000433949 CCDC162PA2VCL2 907 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 A8MT66 165 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms