RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 CWH43Q9H720 699 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 EFCAB1Q9HAE3 211 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 IKZF3Q9UKT9 509 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 LRRC14BA6NHZ5 514 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 CASQ2O14958 399 aaPredicted RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 UPP2O95045 317 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 RHOCP08134 193 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 LINGO3P0C6S8 592 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 MS4A2Q01362 244 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 ILF2Q12905 390 aaKnown RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 SQLEQ14534 574 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 USP41Q3LFD5 358 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 TMEM154Q6P9G4 183 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 CHST9Q7L1S5 443 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 OR4K2Q8NGD2 314 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 SERPINI1Q99574 410 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 INTS10Q9NVR2 710 aaKnown RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 ZDHHC7Q9NXF8 308 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 AGO1Q9UL18 857 aaKnown RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 TBC1D30Q9Y2I9 924 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 UBXN8O00124 270 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 PPP6CO00743 305 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 SIX3O95343 332 aaPredicted RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 CRTAMO95727 393 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 CXCL10P02778 98 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 MSX2P35548 267 aaPredicted RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 ARF5P84085 180 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 TAF1AQ15573 450 aaPredicted RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.97■□□□□ 0.311e-9■■■□□ 17.5
CTSD-204ENST00000433655 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 RYBPQ8N488 228 aaPredicted RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 AFAP1L2Q8N4X5 818 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 PTGR2Q8N8N7 351 aaPredicted RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 GDPD5Q8WTR4 605 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 MYRFLQ96LU7 910 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 C3orf30Q96M34 536 aa16.97■□□□□ 0.31
CTSD-204ENST00000433655 KLF16Q9BXK1 252 aaPredicted RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 AFF4Q9UHB7 1163 aaKnown RBP16.97■□□□□ 0.31
CTSD-204ENST00000433655 OBSL1O75147 1896 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 A0A1B0GVM2 712 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 C2orf78A6NCI8 922 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 FBP2O00757 339 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 CFLARO15519 480 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 TSPAN3O60637 253 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 GNRH1P01148 92 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 IRF1P10914 325 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 CDKN1CP49918 316 aaPredicted RBP16.96■□□□□ 0.31
CTSD-204ENST00000433655 CDH13P55290 713 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 SH3BP2P78314 561 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 LRRC36Q1X8D7 754 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 AFTPHQ6ULP2 937 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.316e-21■■■■■ 27
CTSD-204ENST00000433655 C16orf59Q7L2K0 433 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 GLT6D1Q7Z4J2 308 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 SDCCAG8Q86SQ7 713 aaPredicted RBP16.96■□□□□ 0.31
CTSD-204ENST00000433655 RHEBL1Q8TAI7 183 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 EBF3Q9H4W6 596 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 SCUBE2Q9NQ36 999 aa16.96■□□□□ 0.31
CTSD-204ENST00000433655 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.96■□□□□ 0.3
CTSD-204ENST00000433655 CBX4O00257 560 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 UBDO15205 165 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 PQBP1O60828 265 aaKnown RBP16.96■□□□□ 0.3
CTSD-204ENST00000433655 SMIM24O75264 130 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 CDK14O94921 469 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 ABLIM3O94929 683 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 HDCP19113 662 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 CCL23P55773 120 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 ZNF177Q13360 481 aaPredicted RBP16.96■□□□□ 0.3
CTSD-204ENST00000433655 PDAP1Q13442 181 aaKnown RBP16.96■□□□□ 0.3
CTSD-204ENST00000433655 ART3Q13508 389 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 PTPRRQ15256 657 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 GSTA3Q16772 222 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 ADGRF1Q5T601 910 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 CAPRIN2Q6IMN6 1127 aaKnown RBP16.96■□□□□ 0.3
CTSD-204ENST00000433655 RNF148Q8N7C7 305 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 SNX31Q8N9S9 440 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 RMDN1Q96DB5 314 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 IGSF21Q96ID5 467 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 SEZ6LQ9BYH1 1024 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 TFB2MQ9H5Q4 396 aaKnown RBP16.96■□□□□ 0.3
CTSD-204ENST00000433655 ARIH1Q9Y4X5 557 aaPredicted RBP16.96■□□□□ 0.3
CTSD-204ENST00000433655 PCDHGC4Q9Y5F7 938 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 PCDHGA7Q9Y5G6 932 aa16.96■□□□□ 0.3
CTSD-204ENST00000433655 ACOT8O14734 319 aa16.95■□□□□ 0.3
CTSD-204ENST00000433655 MT-CO1P00395 513 aa16.95■□□□□ 0.3
CTSD-204ENST00000433655 PMLP29590 882 aa16.95■□□□□ 0.3
CTSD-204ENST00000433655 FMO4P31512 558 aa16.95■□□□□ 0.3
CTSD-204ENST00000433655 ALDH7A1P49419 539 aaKnown RBP16.95■□□□□ 0.3
CTSD-204ENST00000433655 PLD1Q13393 1074 aa16.95■□□□□ 0.3
CTSD-204ENST00000433655 LRP8Q14114 963 aa16.95■□□□□ 0.3
CTSD-204ENST00000433655 FASTKQ14296 549 aaKnown RBP16.95■□□□□ 0.3
CTSD-204ENST00000433655 RNF219Q5W0B1 726 aaPredicted RBP16.95■□□□□ 0.3
CTSD-204ENST00000433655 PAQR3Q6TCH7 311 aa16.95■□□□□ 0.3
CTSD-204ENST00000433655 LPCAT1Q8NF37 534 aa16.95■□□□□ 0.3
CTSD-204ENST00000433655 TMA16Q96EY4 203 aaKnown RBP16.95■□□□□ 0.3
CTSD-204ENST00000433655 NSUN5Q96P11 429 aaKnown RBP16.95■□□□□ 0.3
CTSD-204ENST00000433655 FBRSL1Q9HCM7 1045 aaKnown RBP16.95■□□□□ 0.3
CTSD-204ENST00000433655 TRPC7Q9HCX4 862 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms