RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CTDSP2O14595 271 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 TBX10O75333 385 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 DDNO94850 711 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 LCATP04180 440 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 CYC1P08574 325 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM11P17152 192 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 DDX5P17844 614 aaKnown RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 CD58P19256 250 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 FBLP22087 321 aaKnown RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 RFX5P48382 616 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 MMP14P50281 582 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 SUOXP51687 545 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZP1P60852 638 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 GAD2Q05329 585 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 GRAPQ13588 217 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARHGEF6Q15052 776 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 C15orf59Q2T9L4 293 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 CCDC184Q52MB2 194 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 SPECC1Q5M775 1068 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 MORN5Q5VZ52 161 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 NUGGCQ68CJ6 796 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ADALQ6DHV7 355 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 LCN10Q6JVE6 187 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 CES5AQ6NT32 575 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ANKRD23Q86SG2 305 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 AACSQ86V21 672 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 DNAAF5Q86Y56 855 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 FOXRED2Q8IWF2 684 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 MB21D2Q8IYB1 491 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 SRRM1Q8IYB3 904 aaKnown RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 MMP21Q8N119 569 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARFGAP1Q8N6T3 406 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 TDRD5Q8NAT2 981 aaKnown RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 SCCPDHQ8NBX0 429 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 KCTD6Q8NC69 237 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 PTPMT1Q8WUK0 201 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF622Q969S3 477 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ERGIC1Q969X5 290 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 OTULINQ96BN8 352 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMCO6Q96DC7 493 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 RADILQ96JH8 1075 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZMAT2Q96NC0 199 aaKnown RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 DACH2Q96NX9 599 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 AP1M1Q9BXS5 423 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 OR10A4Q9H209 315 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 HRH4Q9H3N8 390 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 NDST4Q9H3R1 872 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 DENND2DQ9H6A0 471 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 FZD3Q9NPG1 666 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 HINT3Q9NQE9 182 aaKnown RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 SIRT3Q9NTG7 399 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 DECR2Q9NUI1 292 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 CISD1Q9NZ45 108 aaKnown RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 CFDP1Q9UEE9 299 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ANAPC2Q9UJX6 822 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 FBXW11Q9UKB1 542 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ACSL5Q9ULC5 683 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 PLAGL1Q9UM63 463 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 COG5Q9UP83 839 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ERVK-11Q9UQG0 969 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 FRMD4BQ9Y2L6 1034 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 PTRH2Q9Y3E5 179 aaKnown RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM184BQ9Y519 407 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 MAGED1Q9Y5V3 778 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF541Q9H0D2 1346 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 WDR62O43379 1518 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 C1orf226A1L170 272 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 KCNU1A8MYU2 1149 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 VCYO14598 125 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 ATP2A1O14983 1001 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 OGG1O15527 345 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 NDUFB8O95169 186 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 TFPIP10646 304 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARSBP15848 533 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 PRLRP16471 622 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 KELP23276 732 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 PIK3CAP42336 1068 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 ALDH7A1P49419 539 aaKnown RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 GPR143P51810 404 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 RAD23AP54725 363 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 P2RX3P56373 397 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMPRSS3P57727 454 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 SORDQ00796 357 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 CALD1Q05682 793 aaKnown RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 TRAF1Q13077 416 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 NAB2Q15742 525 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 EFNB3Q15768 340 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 MMEL1Q495T6 779 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 BMP2KLQ5H9B9 411 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 PPP6R3Q5H9R7 873 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 COLEC12Q5KU26 742 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 DAB2IPQ5VWQ8 1189 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARMC3Q5W041 872 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM198Q66K66 360 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 SLC2A7Q6PXP3 512 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 CRELD2Q6UXH1 353 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 Q6ZSV7 163 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 PLPPR4Q7Z2D5 763 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms