RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 NUDT22Q9BRQ3 303 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 NAT10Q9H0A0 1025 aaKnown RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 CD84Q9UIB8 345 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 SUFUQ9UMX1 484 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 UNC13CQ8NB66 2214 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 NVLO15381 856 aaKnown RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 HTRA2O43464 458 aaPredicted RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 ECEL1O95672 775 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 PEX11BO96011 259 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 FUCA1P04066 466 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 CEACAM5P06731 702 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 CYP2A6P11509 494 aaPredicted RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 GZMAP12544 262 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 CR2P20023 1033 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 HSPA9P38646 679 aaKnown RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 SSR1P43307 286 aaKnown RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 PPM1FP49593 454 aaPredicted RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 ZNF135P52742 658 aaPredicted RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 B4GALNT1Q00973 533 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 NFATC3Q12968 1075 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 FILIP1LQ4L180 1135 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 TDRD12Q587J7 1177 aaKnown RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 TXNRD3NBQ6F5E7 133 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 Q6ZVL8 140 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 USP45Q70EL2 814 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 POLNQ7Z5Q5 900 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 TRIM74Q86UV6 250 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 PIM3Q86V86 326 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 NRROSQ86YC3 692 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 GPBAR1Q8TDU6 330 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 SGF29Q96ES7 293 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 TRIM11Q96F44 468 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 BTBD6Q96KE9 485 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 SMIM14Q96QK8 99 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 ARHGAP9Q9BRR9 750 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 TEX101Q9BY14 249 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 FRMD8Q9BZ67 464 aaPredicted RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 MRPL47Q9HD33 250 aaKnown RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 NT5MQ9NPB1 228 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 AKAP7Q9P0M2 348 aaPredicted RBP13.89□□□□□ -0.19
SEC13-211ENST00000431352 SEPT10Q9P0V9 454 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 PLEKHM1Q9Y4G2 1056 aa13.89□□□□□ -0.19
SEC13-211ENST00000431352 C9orf172C9J069 976 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 B4GAT1O43505 415 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 MAFKO60675 156 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 PGLSO95336 258 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 CPNE6O95741 557 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 MBD3O95983 291 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 FGF1P05230 155 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 MYBL1P10243 752 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 RARAP10276 462 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 CCL4P13236 92 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 NFKBIAP25963 317 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 PCK1P35558 622 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 GJC1P36383 396 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 ITKQ08881 620 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 KRT81Q14533 505 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 ARMC12Q5T9G4 340 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 MARC1Q5VT66 337 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 NKAIN2Q5VXU1 208 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 RFLNAQ6ZTI6 216 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 MARK2Q7KZI7 788 aaKnown RBP13.88□□□□□ -0.19
SEC13-211ENST00000431352 EXD3Q8N9H8 876 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 TMEM159Q96B96 161 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 CCDC74BQ96LY2 380 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 TRIM4Q9C037 500 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 PCDH18Q9HCL0 1135 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 AIPL1Q9NZN9 384 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 ACSL6Q9UKU0 697 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 PHTF1Q9UMS5 762 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 TMEM98Q9Y2Y6 226 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 TTLL3Q9Y4R7 772 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 PCDHB11Q9Y5F2 797 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 PCDHGA4Q9Y5G9 962 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 SCN8AQ9UQD0 1980 aa13.88□□□□□ -0.19
SEC13-211ENST00000431352 A0A1W2PQ67 120 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 MAP3K6O95382 1288 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 FAM87AP0C7U9 286 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 MPSTP25325 297 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 SERPINB6P35237 376 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 PRKCIP41743 596 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 ACTR1BP42025 376 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 GPR1P46091 355 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 CDH6P55285 790 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 ACTR1AP61163 376 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 CYP4F2P78329 520 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 NFKB2Q00653 900 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 CTBSQ01459 385 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 MMRN1Q13201 1228 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 BOLA3Q53S33 107 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 LRRC66Q68CR7 880 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 ZNF761Q86XN6 746 aaPredicted RBP13.87□□□□□ -0.19
SEC13-211ENST00000431352 SPOCK2Q92563 424 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 PMEPA1Q969W9 287 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 NAP1L5Q96NT1 182 aaPredicted RBP13.87□□□□□ -0.19
SEC13-211ENST00000431352 OR2M4Q96R27 311 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 SEMA3CQ99985 751 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 FAM117AQ9C073 453 aa13.87□□□□□ -0.19
SEC13-211ENST00000431352 TRNAU1APQ9NX07 287 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms