RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RTP5Q14D33 572 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 PTPRRQ15256 657 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 PERM1Q5SV97 790 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 CDCP2Q5VXM1 449 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 NPNTQ6UXI9 565 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 NYAP1Q6ZVC0 841 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 PELI3Q8N2H9 469 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 KYQ8NBH2 561 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 WDR48Q8TAF3 677 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 AP2M1Q96CW1 435 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 TEX101Q9BY14 249 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 ADGRE3Q9BY15 652 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 BRD8Q9H0E9 1235 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 SUDS3Q9H7L9 328 aaPredicted RBP17.56■□□□□ 0.4
NUP50-208ENST00000430547 CARS2Q9HA77 564 aaKnown RBP17.56■□□□□ 0.4
NUP50-208ENST00000430547 CD84Q9UIB8 345 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
NUP50-208ENST00000430547 PCDHA13Q9Y5I0 950 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 ALG6Q9Y672 507 aa17.56■□□□□ 0.4
NUP50-208ENST00000430547 ZFC3H1O60293 1989 aaKnown RBP17.55■□□□□ 0.4
NUP50-208ENST00000430547 URB1O60287 2271 aaKnown RBP17.55■□□□□ 0.4
NUP50-208ENST00000430547 PYGLP06737 847 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 TEAD1P28347 426 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 CDK3Q00526 305 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 DPTQ07507 201 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 ZBTB17Q13105 803 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 KAZNQ674X7 775 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 KCTD16Q68DU8 428 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 MFSD7Q6UXD7 560 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 RBM44Q6ZP01 1051 aaKnown RBP17.55■□□□□ 0.4
NUP50-208ENST00000430547 CCDC50Q8IVM0 306 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 CBARPQ8N350 705 aaPredicted RBP17.55■□□□□ 0.4
NUP50-208ENST00000430547 FAM46DQ8NEK8 389 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 OR6C4Q8NGE1 309 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 DCBLD2Q96PD2 775 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 PANX2Q96RD6 677 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 CCDC3Q9BQI4 270 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 CEP41Q9BYV8 373 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 TMEM168Q9H0V1 697 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 RBSNQ9H1K0 784 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 PCDHB1Q9Y5F3 818 aa17.55■□□□□ 0.4
NUP50-208ENST00000430547 COL27A1Q8IZC6 1860 aaPredicted RBP17.54■□□□□ 0.4
NUP50-208ENST00000430547 CHD6Q8TD26 2715 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 A0A0A6YYK5 440 aaPredicted RBP17.54■□□□□ 0.4
NUP50-208ENST00000430547 A0A0U1RQS6 177 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 C1orf232A0A0U1RR37 186 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 USP12O75317 370 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 TCEA3O75764 348 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 CDKN2BP42772 138 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 NR2C2P49116 596 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 ILF3Q12906 894 aaKnown RBP eCLIP17.54■□□□□ 0.4
NUP50-208ENST00000430547 SPIDRQ14159 915 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 C11orf63Q6NUN7 778 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 TECPR1Q7Z6L1 1165 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 DAAM2Q86T65 1068 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 CCHCR1Q8TD31 782 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 AGAP3Q96P47 875 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 OLFM3Q96PB7 478 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 SMIM14Q96QK8 99 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 MLPHQ9BV36 600 aaPredicted RBP17.54■□□□□ 0.4
NUP50-208ENST00000430547 GSDMCQ9BYG8 508 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 GOLPH3Q9H4A6 298 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 DPEP2Q9H4A9 486 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 LHX6Q9UPM6 363 aa17.54■□□□□ 0.4
NUP50-208ENST00000430547 FAM208BQ5VWN6 2430 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 B4DGG1 531 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 BRINP1O60477 761 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 CST8O60676 142 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 ZRANB2O95218 330 aaKnown RBP eCLIP17.53■□□□□ 0.4
NUP50-208ENST00000430547 CLDN7O95471 211 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 ACTN2P35609 894 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 GNPDA1P46926 289 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 STC1P52823 247 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 NAP1L1P55209 391 aaKnown RBP17.53■□□□□ 0.4
NUP50-208ENST00000430547 SKOR1P84550 965 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 PTSQ03393 145 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 IHHQ14623 411 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 ISXQ2M1V0 245 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 TFDP3Q5H9I0 405 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 DOK6Q6PKX4 331 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 C19orf48Q6RUI8 117 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 SPOCD1Q6ZMY3 1216 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 ZNF765Q7L2R6 523 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 NT5DC3Q86UY8 548 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 TMTC1Q8IUR5 882 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 NRSN1Q8IZ57 195 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 CNTD1Q8N815 330 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 KIAA1524Q8TCG1 905 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 CCDC74AQ96AQ1 378 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 GRAMD1AQ96CP6 724 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 RBM41Q96IZ5 413 aaKnown RBP17.53■□□□□ 0.4
NUP50-208ENST00000430547 FRMD8Q9BZ67 464 aaPredicted RBP17.53■□□□□ 0.4
NUP50-208ENST00000430547 ABCG8Q9H221 673 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 PKD2L2Q9NZM6 624 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 TFR2Q9UP52 801 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 GPSM3Q9Y4H4 160 aa17.53■□□□□ 0.4
NUP50-208ENST00000430547 SOWAHDA6NJG2 315 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 ANKRD66B4E2M5 251 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 RRP8O43159 456 aaKnown RBP17.52■□□□□ 0.4
NUP50-208ENST00000430547 NDUFA10O95299 355 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms