RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TREHO43280 583 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 SRP72O76094 671 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TMCC1O94876 653 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TFAP2AP05549 437 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 ASGR1P07306 291 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 AKR1A1P14550 325 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 AVPR1AP37288 418 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 GRIA2P42262 883 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 SERPINH1P50454 418 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 RPS6KA3P51812 740 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 MRPS6P82932 125 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 MPP1Q00013 466 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 ZP2Q05996 745 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 SULT2A1Q06520 285 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 CTBP1Q13363 440 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 ITGA7Q13683 1181 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 APOFQ13790 326 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 BTG3Q14201 252 aaPredicted RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 POU6F1Q14863 301 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 COL19A1Q14993 1142 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 MAP7D1Q3KQU3 841 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 COQ5Q5HYK3 327 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 REP15Q6BDI9 236 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 ZNF787Q6DD87 383 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 ZNF470Q6ECI4 717 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 GPRIN1Q7Z2K8 1008 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 ARHGAP22Q7Z5H3 698 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 MRPL10Q7Z7H8 261 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TLK2Q86UE8 772 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 CUZD1Q86UP6 607 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 SATL1Q86VE3 508 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 CEP97Q8IW35 865 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 DENND6AQ8IWF6 608 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 CLYBLQ8N0X4 340 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 RTL3Q8N8U3 475 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TXNDC5Q8NBS9 432 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 HM13Q8TCT9 377 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 USP33Q8TEY7 942 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TSPEARQ8WU66 669 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 EDEM1Q92611 657 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 MYLPFQ96A32 169 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 EME1Q96AY2 570 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TMA16Q96EY4 203 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 CELF6Q96J87 481 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 HIC2Q96JB3 615 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 PKP2Q99959 881 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 OMDQ99983 421 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 PRR14Q9BWN1 585 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 SLC39A8Q9C0K1 460 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 MFSD1Q9H3U5 465 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 ATP13A1Q9HD20 1204 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 FAM105AQ9NUU6 356 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 ARMC1Q9NVT9 282 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TMEM45AQ9NWC5 275 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 OSER1Q9NX31 292 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 CACNA2D2Q9NY47 1150 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TUBA8Q9NY65 449 aaPredicted RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 UBP1Q9NZI7 540 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 CIDEBQ9UHD4 219 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 RIMKLBQ9ULI2 386 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 G3BP2Q9UN86 482 aaKnown RBP8.72□□□□□ -1.01
GABPB1-205ENST00000429662 NDUFAF1Q9Y375 327 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 TRAF6Q9Y4K3 522 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 PCDHGA7Q9Y5G6 932 aa8.72□□□□□ -1.01
GABPB1-205ENST00000429662 SCN10AQ9Y5Y9 1956 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 TYW5A2RUC4 315 aaKnown RBP8.71□□□□□ -1.02
GABPB1-205ENST00000429662 LCHNA4D1U4 455 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 AQP12BA6NM10 295 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 A8MT66 165 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 GOLGA8TH3BQL2 631 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 GPR182O15218 404 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 NRP2O60462 931 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 PAGE1O75459 146 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 FGF4P08620 206 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 ZNF26P17031 533 aaPredicted RBP8.71□□□□□ -1.02
GABPB1-205ENST00000429662 TYMPP19971 482 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 ARNTP27540 789 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 GMPRP36959 345 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 ABCG1P45844 678 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 PKNOX1P55347 436 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 WNT3AP56704 352 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 USP46P62068 366 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 TSPY1Q01534 308 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 FOXM1Q08050 763 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 BNIP2Q12982 314 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 GRIK2Q13002 908 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 CSHL1Q14406 222 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 SMAD1Q15797 465 aaKnown RBP8.71□□□□□ -1.02
GABPB1-205ENST00000429662 UPP1Q16831 310 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 MGAT5BQ3V5L5 792 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 LRRC23Q53EV4 343 aaPredicted RBP8.71□□□□□ -1.02
GABPB1-205ENST00000429662 AGKQ53H12 422 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 HECTD2Q5U5R9 776 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 TMEM198Q66K66 360 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 C8orf82Q6P1X6 216 aaPredicted RBP8.71□□□□□ -1.02
GABPB1-205ENST00000429662 CNSTQ6PJW8 725 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 KDELC1Q6UW63 502 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 RBM44Q6ZP01 1051 aaKnown RBP8.71□□□□□ -1.02
GABPB1-205ENST00000429662 EFL1Q7Z2Z2 1120 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms