RNA–Protein interactions for RNA: ENST00000429339.5

RAE1-205, Transcript of ribonucleic acid export 1, humanhuman

TSL 5

Gene RAE1, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-205ENST00000429339 ECHDC3Q96DC8 303 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 SCARF2Q96GP6 870 aaPredicted RBP10.08□□□□□ -0.8
RAE1-205ENST00000429339 ELMO2Q96JJ3 720 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 LURAP1Q96LR2 239 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 CFAP57Q96MR6 1250 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 GDAP1L1Q96MZ0 367 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 TEFMQ96QE5 360 aaKnown RBP10.08□□□□□ -0.8
RAE1-205ENST00000429339 TEX101Q9BY14 249 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 TWSG1Q9GZX9 223 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 INTS2Q9H0H0 1204 aaKnown RBP10.08□□□□□ -0.8
RAE1-205ENST00000429339 ACTL8Q9H568 366 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 SUV39H2Q9H5I1 410 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 TMEM248Q9NWD8 314 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 PPARGC1AQ9UBK2 798 aaKnown RBP10.08□□□□□ -0.8
RAE1-205ENST00000429339 ARMCX3Q9UH62 379 aaPredicted RBP10.08□□□□□ -0.8
RAE1-205ENST00000429339 MOSPD1Q9UJG1 213 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 TMEM59LQ9UK28 342 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 SLC5A6Q9Y289 635 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 SLC17A4Q9Y2C5 497 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 ATP8A1Q9Y2Q0 1164 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 PCDHGA9Q9Y5G4 932 aaKnown RBP10.08□□□□□ -0.8
RAE1-205ENST00000429339 PCDHGA6Q9Y5G7 932 aa10.08□□□□□ -0.8
RAE1-205ENST00000429339 GOLGA6L3A6NEY3 463 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 ARGFXA6NJG6 315 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 TRAFD1O14545 582 aaPredicted RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 STX10O60499 249 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 ZG16O60844 167 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 MYCLP1P12525 358 aaPredicted RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 LEPRP48357 1165 aaKnown RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 CCL11P51671 97 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 PGDP52209 483 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 PPP1CAP62136 330 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 MC1RQ01726 317 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 DEUP1Q05D60 604 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 PNOCQ13519 176 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 CNGA3Q16281 694 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 C15orf59Q2T9L4 293 aaPredicted RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 MIIPQ5JXC2 388 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 SP5Q6BEB4 398 aaPredicted RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 KRBA2Q6ZNG9 492 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 HSD11B1LQ7Z5J1 315 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 ZNF295-AS1Q8N0V1 137 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 CISD2Q8N5K1 135 aaKnown RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 ESX1Q8N693 406 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 KIAA1524Q8TCG1 905 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 HAPLN3Q96S86 360 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 AGAP2Q99490 1192 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 SLC25A23Q9BV35 468 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 TRIM62Q9BVG3 475 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 C1QTNF7Q9BXJ2 289 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 ULBP3Q9BZM4 244 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 ZBTB20Q9HC78 741 aaPredicted RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 TRNAU1APQ9NX07 287 aaKnown RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.07□□□□□ -0.8
RAE1-205ENST00000429339 AKAP7Q9P0M2 348 aaPredicted RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 TMEM98Q9Y2Y6 226 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 PRKAB1Q9Y478 270 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 CSAG2Q9Y5P2 127 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 SLC30A1Q9Y6M5 507 aa10.07□□□□□ -0.8
RAE1-205ENST00000429339 MN1Q10571 1320 aaPredicted RBP10.07□□□□□ -0.8
RAE1-205ENST00000429339 CACNA1CQ13936 2221 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 CXorf51AA0A1B0GTR3 108 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 PIPSLA2A3N6 862 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 ZSCAN5CA6NGD5 496 aaPredicted RBP10.06□□□□□ -0.8
RAE1-205ENST00000429339 J3KR12 359 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 CACNB4O00305 520 aaPredicted RBP10.06□□□□□ -0.8
RAE1-205ENST00000429339 HNRNPRO43390 633 aaKnown RBP10.06□□□□□ -0.8
RAE1-205ENST00000429339 CMA1P23946 247 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 CLCN1P35523 988 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 ACTR1BP42025 376 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 ACTR1AP61163 376 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 CDK3Q00526 305 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 IHHQ14623 411 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 SLC25A52Q3SY17 297 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 WDR74Q6RFH5 385 aaPredicted RBP10.06□□□□□ -0.8
RAE1-205ENST00000429339 C6orf15Q6UXA7 325 aaPredicted RBP10.06□□□□□ -0.8
RAE1-205ENST00000429339 DPPA4Q7L190 304 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 SLC47A2Q86VL8 602 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 MMP21Q8N119 569 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 SLC38A9Q8NBW4 561 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 CCDC112Q8NEF3 446 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 NCSTNQ92542 709 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 C5orf34Q96MH7 638 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 ZNF396Q96N95 335 aaPredicted RBP10.06□□□□□ -0.8
RAE1-205ENST00000429339 WDR26Q9H7D7 661 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 SIX2Q9NPC8 291 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 UBE2TQ9NPD8 197 aaPredicted RBP10.06□□□□□ -0.8
RAE1-205ENST00000429339 SCHIP1Q9P0W5 487 aaPredicted RBP10.06□□□□□ -0.8
RAE1-205ENST00000429339 B4GALT6Q9UBX8 382 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 TBC1D29Q9UFV1 150 aa10.06□□□□□ -0.8
RAE1-205ENST00000429339 POLR1CO15160 346 aaPredicted RBP10.05□□□□□ -0.8
RAE1-205ENST00000429339 BUB1O43683 1085 aa10.05□□□□□ -0.8
RAE1-205ENST00000429339 F13A1P00488 732 aa10.05□□□□□ -0.8
RAE1-205ENST00000429339 C9P02748 559 aa10.05□□□□□ -0.8
RAE1-205ENST00000429339 RHOQP17081 205 aa10.05□□□□□ -0.8
RAE1-205ENST00000429339 SLC9A1P19634 815 aa10.05□□□□□ -0.8
RAE1-205ENST00000429339 CA5AP35218 305 aa10.05□□□□□ -0.8
RAE1-205ENST00000429339 ETV3P41162 512 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms