RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 OR1D5P58170 312 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 CDK3Q00526 305 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 PTPRRQ15256 657 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 ARMC12Q5T9G4 340 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 OGFOD3Q6PK18 319 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 PRICKLE2Q7Z3G6 844 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 TMPRSS9Q7Z410 1059 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 HSD11B1LQ7Z5J1 315 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 TSPAN33Q86UF1 283 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 ZFAND4Q86XD8 727 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 PTCD2Q8WV60 388 aaKnown RBP14.5□□□□□ -0.09
SDC1-204ENST00000429035 PATE1Q8WXA2 126 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 MED8Q96G25 268 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 MGME1Q9BQP7 344 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 NUDT22Q9BRQ3 303 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 SEMA6CQ9H3T2 930 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 SPATS2LQ9NUQ6 558 aaKnown RBP14.5□□□□□ -0.09
SDC1-204ENST00000429035 TAAR2Q9P1P5 351 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 TMEM63CQ9P1W3 806 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 PHTF1Q9UMS5 762 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 SDK2Q58EX2 2172 aa14.5□□□□□ -0.09
SDC1-204ENST00000429035 A0A0U1RQS6 177 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 ECEL1O95672 775 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 SERPINC1P01008 464 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 RARAP10276 462 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 PNLIPP16233 465 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 CR2P20023 1033 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 PCK1P35558 622 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 PRKCIP41743 596 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 ACTR1BP42025 376 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 GPR1P46091 355 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 POLD2P49005 469 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 HCAR3P49019 387 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 EPHB1P54762 984 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 ACTR1AP61163 376 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 NFATC3Q12968 1075 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 C16orf72Q14CZ0 275 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 MARC1Q5VT66 337 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 TXNRD3NBQ6F5E7 133 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 Q6ZVL8 140 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 MARK2Q7KZI7 788 aaKnown RBP14.49□□□□□ -0.09
SDC1-204ENST00000429035 POLNQ7Z5Q5 900 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 TRIM74Q86UV6 250 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 PIM3Q86V86 326 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 SLITRK4Q8IW52 837 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 RCBTB1Q8NDN9 531 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 JPH3Q8WXH2 748 aaPredicted RBP14.49□□□□□ -0.09
SDC1-204ENST00000429035 SGF29Q96ES7 293 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 FRMD8Q9BZ67 464 aaPredicted RBP14.49□□□□□ -0.09
SDC1-204ENST00000429035 CDH19Q9H159 772 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 PCDH18Q9HCL0 1135 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 AIPL1Q9NZN9 384 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 ANAPC7Q9UJX3 599 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 SSUH2Q9Y2M2 353 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 PCDHB11Q9Y5F2 797 aa14.49□□□□□ -0.09
SDC1-204ENST00000429035 HEMK1Q9Y5R4 338 aaPredicted RBP14.49□□□□□ -0.09
SDC1-204ENST00000429035 A0A1W2PQC6 194 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 B8ZZF3 427 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 EFSO43281 561 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 MFSD11O43934 449 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 MAFKO60675 156 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 PGLSO95336 258 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 MAP3K6O95382 1288 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 CPNE6O95741 557 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 PEX11BO96011 259 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 CEACAM5P06731 702 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 CDH6P55285 790 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 B4GALNT1Q00973 533 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 ZFP36L1Q07352 338 aaKnown RBP14.48□□□□□ -0.09
SDC1-204ENST00000429035 NRROSQ86YC3 692 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 GPBAR1Q8TDU6 330 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 EXTL1Q92935 676 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 TMEM159Q96B96 161 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 CCDC74BQ96LY2 380 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 OR2M4Q96R27 311 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 SEMA3CQ99985 751 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 TEX101Q9BY14 249 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 THAP2Q9H0W7 228 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 KCTD5Q9NXV2 234 aa14.48□□□□□ -0.09
SDC1-204ENST00000429035 A0A1B0GTH6 734 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 C9orf172C9J069 976 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 PSMD11O00231 422 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 NVLO15381 856 aaKnown RBP14.47□□□□□ -0.09
SDC1-204ENST00000429035 ZW10O43264 779 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 FGF1P05230 155 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 CCL4P13236 92 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 ADCY8P40145 1251 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 ZNF165P49910 485 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 CTBSQ01459 385 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 MMRN1Q13201 1228 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 PIGHQ14442 188 aaPredicted RBP14.47□□□□□ -0.09
SDC1-204ENST00000429035 NFKBIBQ15653 356 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 BOLA3Q53S33 107 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 TMEM164Q5U3C3 297 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 NKAIN2Q5VXU1 208 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 LRRC66Q68CR7 880 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 CAVIN1Q6NZI2 390 aaKnown RBP14.47□□□□□ -0.09
SDC1-204ENST00000429035 RFLNAQ6ZTI6 216 aa14.47□□□□□ -0.09
SDC1-204ENST00000429035 ZNF761Q86XN6 746 aaPredicted RBP14.47□□□□□ -0.09
SDC1-204ENST00000429035 NDUFAF2Q8N183 169 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms