RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 BUD23O43709 281 aaKnown RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 SORBS2O94875 1100 aaKnown RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 EFEMP2O95967 443 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 CXCL10P02778 98 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 PIRTP0C851 137 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 RAG1P15918 1043 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 CR2P20023 1033 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 PSMA3P25788 255 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 CDC25CP30307 473 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 ALDH1A3P47895 512 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 ATP6V0D1P61421 351 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 FLOT2Q14254 428 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 ADGRF1Q5T601 910 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 TPGS2Q68CL5 300 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 CAPRIN2Q6IMN6 1127 aaKnown RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 HERC6Q8IVU3 1022 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 HIPK4Q8NE63 616 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 OR52K2Q8NGK3 314 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 PTERQ96BW5 349 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 TRMT2BQ96GJ1 504 aaKnown RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 CDRT15Q96T59 188 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 C6orf203Q9P0P8 240 aaPredicted RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 TBC1D30Q9Y2I9 924 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 UBA6A0AVT1 1052 aaPredicted RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 CCDC189A1A4V9 331 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 MAGEA13PA6NCF6 341 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 A6NHS1 94 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 CBX4O00257 560 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 NDUFS3O75489 264 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 RHOBTB1O94844 696 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 LATS1O95835 1130 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 ME2P23368 584 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 THOP1P52888 689 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 STX1BP61266 288 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 RAD51Q06609 339 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 FASTKQ14296 549 aaKnown RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 PTPRCAPQ14761 206 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 ZNF423Q2M1K9 1284 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 UNC50Q53HI1 259 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 RNF168Q8IYW5 571 aaPredicted RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 CLYBLQ8N0X4 340 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 RYBPQ8N488 228 aaPredicted RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 PTGR2Q8N8N7 351 aaPredicted RBP13.67□□□□□ -0.22
THBS3-202ENST00000428962 OR4K2Q8NGD2 314 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 ZNF461Q8TAF7 563 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 EXT2Q93063 718 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 PPP2R3CQ969Q6 453 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 DERL2Q9GZP9 239 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 MUC3BQ9H195 1237 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 ZDHHC7Q9NXF8 308 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 PSMD13Q9UNM6 376 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 SPO11Q9Y5K1 396 aa13.67□□□□□ -0.22
THBS3-202ENST00000428962 TYW5A2RUC4 315 aaKnown RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 SYCE1LA8MT33 242 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 PSMD12O00232 456 aaPredicted RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 CASQ2O14958 399 aaPredicted RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 PEX1O43933 1283 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 PQBP1O60828 265 aaKnown RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 KERAO60938 352 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 SRP72O76094 671 aaKnown RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 PYGLP06737 847 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 HMGA1P17096 107 aaKnown RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 RPL17P18621 184 aaKnown RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 LPOP22079 712 aaPredicted RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 RGRP47804 291 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 RPL26P61254 145 aaKnown RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 CYTH1Q15438 398 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 MMEL1Q495T6 779 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 TMEM154Q6P9G4 183 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 TMEM126BQ8IUX1 230 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 LPCAT1Q8NF37 534 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 STAG3L4Q8TBR4 150 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 LPGAT1Q92604 370 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 KIAA1191Q96A73 305 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 C19orf60Q96EN9 201 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 IGSF21Q96ID5 467 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 SLC25A23Q9BV35 468 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 KLF16Q9BXK1 252 aaPredicted RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 POLR3BQ9NW08 1133 aaPredicted RBP13.66□□□□□ -0.22
THBS3-202ENST00000428962 TMCO1Q9UM00 188 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 YIPF1Q9Y548 306 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 ACTL7AQ9Y615 435 aa13.66□□□□□ -0.22
THBS3-202ENST00000428962 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 CFLARO15519 480 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 ABLIM3O94929 683 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 KLKB1P03952 638 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 IRF1P10914 325 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 GFAPP14136 432 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 TTPAP49638 278 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 IRX1P78414 480 aaPredicted RBP13.65□□□□□ -0.22
THBS3-202ENST00000428962 TIAL1Q01085 375 aaKnown RBP eCLIP13.65□□□□□ -0.22
THBS3-202ENST00000428962 PLD1Q13393 1074 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms