RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 TEX101Q9BY14 249 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 ADGRE3Q9BY15 652 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 CLPBQ9H078 707 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 NLGN3Q9NZ94 848 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 UBP1Q9NZI7 540 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 KLHL8Q9P2G9 620 aaPredicted RBP16.67■□□□□ 0.26
VRK2-204ENST00000428021 APOBEC3BQ9UH17 382 aaKnown RBP16.67■□□□□ 0.26
VRK2-204ENST00000428021 DNPEPQ9ULA0 475 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 PTPRBP23467 1997 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 TPRP12270 2363 aaKnown RBP16.66■□□□□ 0.26
VRK2-204ENST00000428021 LY6G6EA0A0G2JKS1 128 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 NEMP2A6NFY4 417 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 PMPCBO75439 489 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 SOD1P00441 154 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 CELA2BP08218 269 aaPredicted RBP16.66■□□□□ 0.26
VRK2-204ENST00000428021 CCDC175P0C221 793 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 RBP3P10745 1247 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 TSHRP16473 764 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 TEAD1P28347 426 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 ACADVLP49748 655 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 HK3P52790 923 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 KLF1Q13351 362 aaPredicted RBP16.66■□□□□ 0.26
VRK2-204ENST00000428021 C1orf61Q13536 156 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 PRRT3Q5FWE3 981 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 NLRP8Q86W28 1048 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 HID1Q8IV36 788 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 OR1E3Q8WZA6 343 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 SCAMP4Q969E2 229 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 EID2BQ96D98 161 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 OXNAD1Q96HP4 312 aaPredicted RBP16.66■□□□□ 0.26
VRK2-204ENST00000428021 FCRL5Q96RD9 977 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 WDR24Q96S15 920 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 SLC13A1Q9BZW2 595 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 WDR26Q9H7D7 661 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 USP29Q9HBJ7 922 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 FGF22Q9HCT0 170 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 SPASTQ9UBP0 616 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 FAM153AQ9UHL3 310 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 CD84Q9UIB8 345 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 KLK13Q9UKR3 277 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 TRHDEQ9UKU6 1024 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 PCDHGA1Q9Y5H4 931 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 U3KQA8 63 aa16.66■□□□□ 0.26
VRK2-204ENST00000428021 ACACBO00763 2458 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 PLXNB3Q9ULL4 1909 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 C1orf232A0A0U1RR37 186 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 LOC285095A0A1B0GVY8 99 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 TCRBV7S2A1N4TA0A589 114 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 FAM221BA6H8Z2 402 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 F5H423 210 aaPredicted RBP16.65■□□□□ 0.26
VRK2-204ENST00000428021 CACNB4O00305 520 aaPredicted RBP16.65■□□□□ 0.26
VRK2-204ENST00000428021 RASGRP1O95267 797 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 NDST3O95803 873 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 MYF5P13349 255 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 CKMT2P17540 419 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 WNT3AP56704 352 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 ZNF765Q7L2R6 523 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 HEATR4Q86WZ0 1026 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 RAVER1Q8IY67 606 aaKnown RBP16.65■□□□□ 0.26
VRK2-204ENST00000428021 NRSN1Q8IZ57 195 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 FAM181AQ8N9Y4 354 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 OR56A4Q8NGH8 313 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 AP2M1Q96CW1 435 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 PDXPQ96GD0 296 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 APOLD1Q96LR9 279 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 AGAP2Q99490 1192 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 GORASP1Q9BQQ3 440 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 MAGEE1Q9HCI5 957 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 LZTFL1Q9NQ48 299 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 MRPL40Q9NQ50 206 aaKnown RBP16.65■□□□□ 0.26
VRK2-204ENST00000428021 KLQ9UEF7 1012 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 R3HDM2Q9Y2K5 976 aaKnown RBP16.65■□□□□ 0.26
VRK2-204ENST00000428021 DGKBQ9Y6T7 804 aa16.65■□□□□ 0.26
VRK2-204ENST00000428021 LMO7DNF2Z398 122 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 TPP1O14773 563 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 TNFRSF10CO14798 259 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 FUCA1P04066 466 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 PIRTP0C851 137 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 ALPPL2P10696 532 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 MYCLP1P12525 358 aaPredicted RBP16.64■□□□□ 0.25
VRK2-204ENST00000428021 ACP1P24666 158 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 SPINT3P49223 89 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 BLKP51451 505 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 CDK3Q00526 305 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 DEFB133Q30KQ1 61 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 CCDC157Q569K6 752 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 MEI1Q5TIA1 1274 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 RAET1GQ6H3X3 334 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 DARS2Q6PI48 645 aaKnown RBP16.64■□□□□ 0.25
VRK2-204ENST00000428021 ADAMTSL4Q6UY14 1074 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 LYSMD3Q7Z3D4 306 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 RD3Q7Z3Z2 195 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 CDKL3Q8IVW4 592 aaPredicted RBP16.64■□□□□ 0.25
VRK2-204ENST00000428021 ATL2Q8NHH9 583 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 MRGPRX2Q96LB1 330 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 DUSP23Q9BVJ7 150 aa16.64■□□□□ 0.25
VRK2-204ENST00000428021 RIOK2Q9BVS4 552 aaKnown RBP16.64■□□□□ 0.25
VRK2-204ENST00000428021 FRMD8Q9BZ67 464 aaPredicted RBP16.64■□□□□ 0.25
VRK2-204ENST00000428021 GBA3Q9H227 469 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms