RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CLIC2O15247 247 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PROM1O43490 865 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GATCO43716 136 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC37A4O43826 429 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 NPHS1O60500 1241 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SYNCRIPO60506 623 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ADAM11O75078 769 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF780AO75290 641 aaPredicted RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CABYRO75952 493 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CSPG5O95196 566 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 LYPLA2O95372 231 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SGPL1O95470 568 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TDP2O95551 362 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 STARD3NLO95772 234 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TSPAN12O95859 305 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 C1QBP02746 253 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 THRBP10828 461 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC2A3P11169 496 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 DBTP11182 482 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 BMP3P12645 472 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TCF4P15884 667 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ALOX12P18054 663 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CD58P19256 250 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACO1P21399 889 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CRHBPP24387 322 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 HLA-DMAP28067 261 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 HLA-FP30511 346 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 RPL9P32969 192 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 STAT3P40763 770 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GRIA3P42263 894 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ABCG1P45844 678 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PKNOX1P55347 436 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACTR2P61160 394 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 YWHAEP62258 255 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 RPL10AP62906 217 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ADARB1P78563 741 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 RHAGQ02094 409 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SCN1BQ07699 218 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CD300CQ08708 224 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 INCA1Q0VD86 236 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PAPPAQ13219 1627 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 DPYSL3Q14195 570 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GALEQ14376 348 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCNJ11Q14654 390 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCLAFQ15004 111 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CTF1Q16619 201 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TBRG1Q3YBR2 411 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 HSF5Q4G112 596 aaPredicted RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CBWD6Q4V339 395 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM98BQ52LJ0 330 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GPAT3Q53EU6 434 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 HSD17B12Q53GQ0 312 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CBWD3Q5JTY5 395 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TOR2AQ5JU69 321 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CBWD5Q5RIA9 395 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 FNBP1LQ5T0N5 605 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 LIPMQ5VYY2 423 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 STEAP3Q658P3 488 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC9A4Q6AI14 798 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 BICRALQ6AI39 1079 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 MZT2BQ6NZ67 158 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 MON1BQ7L1V2 547 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 RRM2BQ7LG56 351 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PIWIL4Q7Z3Z4 852 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF438Q7Z4V0 828 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 VN1R5Q7Z5H4 357 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM35AQ86V20 835 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TRIM69Q86WT6 500 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 BRSK2Q8IWQ3 736 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 UBR2Q8IWV8 1755 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 BBS7Q8IWZ6 715 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GPALPP1Q8IXQ4 340 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CCDC116Q8IYX3 515 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CHPFQ8IZ52 775 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 LINC00518Q8N0U6 118 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CADM2Q8N3J6 435 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PHTF2Q8N3S3 785 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM71DQ8N9W8 422 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GLIS3Q8NEA6 775 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZSWIM2Q8NEG5 633 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 APPL2Q8NEU8 664 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 IL17RDQ8NFM7 739 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 LMO3Q8TAP4 145 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZFP90Q8TF47 636 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC22A17Q8WUG5 538 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SDR42E1Q8WUS8 393 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCTD4Q8WVF5 259 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 UFD1Q92890 307 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 MTERF3Q96E29 417 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ELMO2Q96JJ3 720 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SCYL1Q96KG9 808 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 UBXN10Q96LJ8 280 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZSWIM3Q96MP5 696 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP2S1Q96SQ9 504 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CPNE1Q99829 537 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 EBNA1BP2Q99848 306 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 RBM4BQ9BQ04 359 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 CLSTN3Q9BQT9 956 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ARHGAP9Q9BRR9 750 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 FEM1AQ9BSK4 669 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms