RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 FBXO9Q9UK97 447 aaPredicted RBP3.31□□□□□ -1.88
LINC02541-201ENST00000427157 DLGAP4Q9Y2H0 992 aa3.31□□□□□ -1.88
LINC02541-201ENST00000427157 COL2A1P02458 1487 aaPredicted RBP3.3□□□□□ -1.88
LINC02541-201ENST00000427157 EXTL3O43909 919 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 WDR1O75083 606 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 RRM1P23921 792 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 BDKRB2P30411 391 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 HOXA1P49639 335 aaPredicted RBP3.3□□□□□ -1.88
LINC02541-201ENST00000427157 UBE4AQ14139 1066 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 MORC3Q14149 939 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 KRT24Q2M2I5 525 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 CCDC96Q2M329 555 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 C2orf68Q2NKX9 166 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 SLC45A4Q5BKX6 768 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 CCNYL2Q5T2Q4 361 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 HIST2H2BDQ6DRA6 164 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 ASB18Q6ZVZ8 466 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 TADA2BQ86TJ2 420 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 DHX40Q8IX18 779 aaKnown RBP3.3□□□□□ -1.88
LINC02541-201ENST00000427157 ZCCHC9Q8N567 271 aaKnown RBP3.3□□□□□ -1.88
LINC02541-201ENST00000427157 ZBTB2Q8N680 514 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 ADAD2Q8NCV1 583 aaKnown RBP3.3□□□□□ -1.88
LINC02541-201ENST00000427157 ZNF248Q8NDW4 579 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 ELP4Q96EB1 424 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 PCYT2Q99447 389 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 SYT17Q9BSW7 474 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 POLR3CQ9BUI4 534 aaPredicted RBP3.3□□□□□ -1.88
LINC02541-201ENST00000427157 PPP1R3EQ9H7J1 279 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 BPIFA1Q9NP55 256 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 FAM118AQ9NWS6 357 aa3.3□□□□□ -1.88
LINC02541-201ENST00000427157 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.3□□□□□ -1.88
LINC02541-201ENST00000427157 LSM4Q9Y4Z0 139 aaKnown RBP3.3□□□□□ -1.88
LINC02541-201ENST00000427157 hCG_1642624A0A1W2PR95 340 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 TSPAN3O60637 253 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 MT-CYBP00156 380 aaPredicted RBP3.29□□□□□ -1.88
LINC02541-201ENST00000427157 INHBAP08476 426 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 DDX5P17844 614 aaKnown RBP3.29□□□□□ -1.88
LINC02541-201ENST00000427157 NR1D1P20393 614 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 SHMT1P34896 483 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 METAP2P50579 478 aaKnown RBP eCLIP3.29□□□□□ -1.88
LINC02541-201ENST00000427157 PAPOLAP51003 745 aaKnown RBP3.29□□□□□ -1.88
LINC02541-201ENST00000427157 EFNB1P98172 346 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 PDE1BQ01064 536 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 ZC2HC1BQ5TFG8 222 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 SLC35E4Q6ICL7 350 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 TDRPQ86YL5 185 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 TMTC1Q8IUR5 882 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 SPATA6LQ8N4H0 392 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 MAPK1IP1LQ8NDC0 245 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 CADM4Q8NFZ8 388 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 ANKRD9Q96BM1 317 aaPredicted RBP3.29□□□□□ -1.88
LINC02541-201ENST00000427157 MTERF1Q99551 399 aaKnown RBP3.29□□□□□ -1.88
LINC02541-201ENST00000427157 REEP2Q9BRK0 252 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 FSD1Q9BTV5 496 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 HEMGNQ9BXL5 484 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 TTYH1Q9H313 450 aaPredicted RBP3.29□□□□□ -1.88
LINC02541-201ENST00000427157 GPR108Q9NPR9 543 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 KCNK7Q9Y2U2 307 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 FAM96BQ9Y3D0 163 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 LOXL2Q9Y4K0 774 aa3.29□□□□□ -1.88
LINC02541-201ENST00000427157 BLOC1S5-TXNDC5H3BN57 136 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 IFNL4K9M1U5 179 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 IRAK2O43187 625 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 TACC1O75410 805 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 GALTP07902 379 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 GTF2H2Q13888 395 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 ZNF234Q14588 700 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 KRT72Q14CN4 511 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 PDCD2Q16342 344 aaPredicted RBP3.28□□□□□ -1.88
LINC02541-201ENST00000427157 ANO1Q5XXA6 986 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 GTF2H2CQ6P1K8 395 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 METTL2BQ6P1Q9 378 aaKnown RBP3.28□□□□□ -1.88
LINC02541-201ENST00000427157 SRBD1Q8N5C6 995 aaKnown RBP3.28□□□□□ -1.88
LINC02541-201ENST00000427157 C11orf65Q8NCR3 313 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 TNIP2Q8NFZ5 429 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 HUS1BQ8NHY5 278 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 METTL2AQ96IZ6 378 aaKnown RBP3.28□□□□□ -1.88
LINC02541-201ENST00000427157 ST6GAL2Q96JF0 529 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 ZNF354BQ96LW1 612 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 MPHOSPH6Q99547 160 aaKnown RBP3.28□□□□□ -1.88
LINC02541-201ENST00000427157 SH3GL2Q99962 352 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 HINT3Q9NQE9 182 aaKnown RBP3.28□□□□□ -1.88
LINC02541-201ENST00000427157 C20orf141Q9NUB4 165 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 HSPB7Q9UBY9 170 aa3.28□□□□□ -1.88
LINC02541-201ENST00000427157 TEX22C9J3V5 150 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 URODP06132 367 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 DCTP40126 519 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 GPD2P43304 727 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 MMP14P50281 582 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 DRG2P55039 364 aaKnown RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 EEF1A1P68104 462 aaKnown RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 TDGQ13569 410 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 SLC12A1Q13621 1099 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 RNPS1Q15287 305 aaKnown RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 HIST2H2ACQ16777 129 aaPredicted RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 WDR45BQ5MNZ6 344 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 EEF1A1P5Q5VTE0 462 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 TMEM81Q6P7N7 255 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 NOTCH2NLQ7Z3S9 236 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms