RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 GPRIN1Q7Z2K8 1008 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 ZNF761Q86XN6 746 aaPredicted RBP4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 TXLNBQ8N3L3 684 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 SDR16C5Q8N3Y7 309 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 HDDC3Q8N4P3 179 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 MINDY1Q8N5J2 469 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 ALLCQ8N6M5 410 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 FSIP1Q8NA03 581 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 SCAMP4Q969E2 229 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 BICD1Q96G01 975 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 ZNF419Q96HQ0 510 aaPredicted RBP4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 LCORQ96JN0 433 aaPredicted RBP4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 ZNF560Q96MR9 790 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 PNKPQ96T60 521 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 REEP2Q9BRK0 252 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 STRA6Q9BX79 667 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 MAGEH1Q9H213 219 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 PARVGQ9HBI0 331 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 TRPC7Q9HCX4 862 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 FSCN3Q9NQT6 498 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 DDX43Q9NXZ2 648 aaKnown RBP4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 GRHPRQ9UBQ7 328 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 GTF3C4Q9UKN8 822 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 SLC39A10Q9ULF5 831 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 SLC45A2Q9UMX9 530 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 MAGED2Q9UNF1 606 aaPredicted RBP4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 MAN2B2Q9Y2E5 1009 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 CEP83Q9Y592 693 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 URB1O60287 2271 aaKnown RBP4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 OBSL1O75147 1896 aa4.86□□□□□ -1.63
CDC42EP3-202ENST00000422687 COL12A1Q99715 3063 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 A0A087WV48 116 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 A0A1W2PQF6 199 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 TCRBV21S2A2A0A5A6 115 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 TMEM233B4DJY2 109 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 TISP43B9A030 160 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 K7ENM7 598 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 SLC9A3R1O14745 358 aaPredicted RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 KIAA0391O15091 583 aaKnown RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 HOXA3O43365 443 aaPredicted RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 HUS1O60921 280 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 CHEK2O96017 543 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 APODP05090 189 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 CFIP05156 583 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ZNF883P0CG24 379 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 GABRG2P18507 467 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ACAT1P24752 427 aaKnown RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 GABRB3P28472 473 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 LHX1P48742 406 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ATXN3P54252 364 aaPredicted RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 NOP14P78316 857 aaKnown RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 HMGN5P82970 282 aaKnown RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 MYL7Q01449 175 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 KCNB1Q14721 858 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 POSTNQ15063 836 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 BMT2Q1RMZ1 405 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 SOWAHAQ2M3V2 549 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 DCAF12L1Q5VU92 463 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ARL6IP4Q66PJ3 421 aaKnown RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ANKS6Q68DC2 871 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ADALQ6DHV7 355 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ZNF720Q7Z2F6 126 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 PPP1R32Q7Z5V6 425 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 GPBP1Q86WP2 473 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 NAXDQ8IW45 347 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 BRSK2Q8IWQ3 736 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 TP53I13Q8NBR0 393 aaPredicted RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 HMGB4Q8WW32 186 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 DNASE2BQ8WZ79 361 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 TBC1D20Q96BZ9 403 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 HVCN1Q96D96 273 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 OTUB2Q96DC9 234 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 CAMK1GQ96NX5 476 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 HEPHQ9BQS7 1158 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 GTPBP2Q9BX10 602 aaKnown RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 TINAGL1Q9GZM7 467 aaPredicted RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 FAM124BQ9H5Z6 455 aaPredicted RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 TMEM8AQ9HCN3 771 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 OBP2BQ9NPH6 170 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 NECTIN3Q9NQS3 549 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 BLOC1S4Q9NUP1 217 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 FBXO34Q9NWN3 711 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 TRPM5Q9NZQ8 1165 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 SIX4Q9UIU6 781 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 AGO2Q9UKV8 859 aaKnown RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ITGA11Q9UKX5 1188 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 NFE2L3Q9Y4A8 694 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 ATXN2Q99700 1313 aaKnown RBP4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 PTPRQQ9UMZ3 2332 aa4.85□□□□□ -1.63
CDC42EP3-202ENST00000422687 KNL1Q8NG31 2342 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 A0A1B0GTL3 188 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 UBE2QL1A1L167 161 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 FAM234BA2RU67 622 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 HCRTO43612 131 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 ATP2C2O75185 946 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 ZNF217O75362 1048 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 TULP3O75386 442 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 STC2O76061 302 aa4.84□□□□□ -1.63
CDC42EP3-202ENST00000422687 ITGB3P05106 788 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms