RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SPPL2CQ8IUH8 684 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 NSMCE3Q96MG7 304 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 TSGA13Q96PP4 275 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 STK39Q9UEW8 545 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 IKZF3Q9UKT9 509 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 A0A1B0GVG6 124 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 A0A1W2PQ67 120 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 KRT87PA6NCN2 255 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 FFAR3O14843 346 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 GPR42O15529 346 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 RHOQP17081 205 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 MRPL10Q7Z7H8 261 aaKnown RBP13.34□□□□□ -0.27
MCF2L-213ENST00000421756 PIANPQ8IYJ0 282 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 COLGALT2Q8IYK4 626 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 OR4L1Q8NH43 312 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 BTN2A3PQ96KV6 586 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 SOX17Q9H6I2 414 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-213ENST00000421756 CATSPERZQ9NTU4 200 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
MCF2L-213ENST00000421756 NSMCE4AQ9NXX6 385 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 CD274Q9NZQ7 290 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 AP4B1Q9Y6B7 739 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 C15orf38-AP3S2A0A0A6YYH1 394 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 MTMR11A4FU01 709 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 C2orf78A6NCI8 922 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 CDKL1Q00532 357 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 DBN1Q16643 649 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 REP15Q6BDI9 236 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 UGT3A1Q6NUS8 523 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 ARPINQ7Z6K5 226 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 ARRDC2Q8TBH0 407 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 GATA6Q92908 595 aa13.33□□□□□ -0.27
MCF2L-213ENST00000421756 RPL26L1Q9UNX3 145 aaKnown RBP13.33□□□□□ -0.27
MCF2L-213ENST00000421756 H0Y626 953 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 LDB2O43679 373 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 TRIM16O95361 564 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 PEX11BO96011 259 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 IGLV3-25P01717 112 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 UQCRBP14927 111 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 NRG1Q02297 640 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-213ENST00000421756 RARS2Q5T160 578 aaKnown RBP13.33□□□□□ -0.28
MCF2L-213ENST00000421756 PSAPL1Q6NUJ1 521 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 FUT10Q6P4F1 479 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 SLC30A9Q6PML9 568 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 MILR1Q7Z6M3 343 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 CPNE9Q8IYJ1 553 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 ST13P4Q8IZP2 240 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-213ENST00000421756 CALML6Q8TD86 181 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 TMEM74Q96NL1 305 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 ASB1Q9Y576 335 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 TRPC5OSA6NMA1 111 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 TARM1B6A8C7 271 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 GIPC1O14908 333 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 PRAMEF12O95522 483 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 RHOCP08134 193 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 PCNAP12004 261 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 OXCT1P55809 520 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 PLOD1Q02809 727 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-213ENST00000421756 COL9A2Q14055 689 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-213ENST00000421756 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 RNF219Q5W0B1 726 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-213ENST00000421756 SLAMF8Q9P0V8 285 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 CROCCQ5TZA2 2017 aa13.33□□□□□ -0.28
MCF2L-213ENST00000421756 A0A0J9YYE9 177 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 FBP2O00757 339 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 CLASP2O75122 1294 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 MYL4P12829 197 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 CORO1AP31146 461 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 GRIA2P42262 883 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 GDF5P43026 501 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 POM121L1PQ3SYA9 428 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 RABL3Q5HYI8 236 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 KBTBD6Q86V97 674 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 RALGPS2Q86X27 583 aaPredicted RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 C19orf60Q96EN9 201 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 CDKN2AIPNLQ96HQ2 116 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 SIKE1Q9BRV8 207 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 VCX3BQ9H321 246 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 EML4Q9HC35 981 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 SPATS2LQ9NUQ6 558 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 UBAP1Q9NZ09 502 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 DNAJC15Q9Y5T4 150 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 CHD7Q9P2D1 2997 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 KIF3CO14782 793 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 CYP11A1P05108 521 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 RBP1P09455 135 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 GSTT1P30711 240 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 CDH15P55291 814 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 DSC3Q14574 896 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 UNC50Q53HI1 259 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 MANEALQ5VSG8 457 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 FAM151BQ6UXP7 276 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 RAB44Q7Z6P3 723 aaPredicted RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 FBXO39Q8N4B4 442 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 AFAP1L2Q8N4X5 818 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 HMGCLL1Q8TB92 370 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 SMG9Q9H0W8 520 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms