RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SAMD15Q9P1V8 674 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 SLC2A6Q9UGQ3 507 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 CHMP2BQ9UQN3 213 aa15.7■□□□□ 0.1
DDX55-203ENST00000421670 CACNA1HO95180 2353 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 MROH6A6NGR9 719 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 PSMD11O00231 422 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 MAP3K13O43283 966 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 LZTS3O60299 673 aaPredicted RBP15.69■□□□□ 0.1
DDX55-203ENST00000421670 TM7SF2O76062 418 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 RECQL5O94762 991 aaPredicted RBP15.69■□□□□ 0.1
DDX55-203ENST00000421670 LPOP22079 712 aaPredicted RBP15.69■□□□□ 0.1
DDX55-203ENST00000421670 ELK3P41970 407 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 ELF2Q15723 593 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 PCID2Q5JVF3 399 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 NEK5Q6P3R8 708 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 CENPUQ71F23 418 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 TMEFF1Q8IYR6 380 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 ZBED8Q8IZ13 594 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 GAB3Q8WWW8 586 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 SNX19Q92543 992 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 MYOCQ99972 504 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 FAM129AQ9BZQ8 928 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 SAYSD1Q9NPB0 183 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 FZD3Q9NPG1 666 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 IL17CQ9P0M4 197 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 MTRF1LQ9UGC7 380 aaKnown RBP15.69■□□□□ 0.1
DDX55-203ENST00000421670 SOX13Q9UN79 622 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 PKP3Q9Y446 797 aa15.69■□□□□ 0.1
DDX55-203ENST00000421670 C10orf142B7Z368 130 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 E7ESA3 106 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 STX7O15400 261 aaKnown RBP15.68■□□□□ 0.1
DDX55-203ENST00000421670 PAK4O96013 591 aaPredicted RBP15.68■□□□□ 0.1
DDX55-203ENST00000421670 BPIP17213 487 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 NMBRP28336 390 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 TNFRSF8P28908 595 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 SPINT3P49223 89 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 SMAD1Q15797 465 aaKnown RBP15.68■□□□□ 0.1
DDX55-203ENST00000421670 TSTD2Q5T7W7 516 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 ALS2CLQ60I27 953 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 KIAA0895LQ68EN5 471 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 SLC36A4Q6YBV0 504 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 ARMCX6Q7L4S7 300 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 CBARPQ8N350 705 aaPredicted RBP15.68■□□□□ 0.1
DDX55-203ENST00000421670 OR13J1Q8NGT2 312 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 RUBCNQ92622 972 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 SCAMP4Q969E2 229 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 BIRC7Q96CA5 298 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 NUS1Q96E22 293 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 STAMBPL1Q96FJ0 436 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 DTD2Q96FN9 168 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 HSPA12BQ96MM6 686 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 KIFC1Q9BW19 673 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 SLC17A9Q9BYT1 436 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 EBF2Q9HAK2 575 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 ZSCAN32Q9NX65 697 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 PKD2L2Q9NZM6 624 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.68■□□□□ 0.1
DDX55-203ENST00000421670 TEX264Q9Y6I9 313 aa15.68■□□□□ 0.1
DDX55-203ENST00000421670 WNT9AO14904 365 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 SLC31A1O15431 190 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 LATO43561 262 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 HRO43593 1189 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 PDE1BQ01064 536 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 ESRP1Q6NXG1 681 aaKnown RBP15.67■□□□□ 0.1
DDX55-203ENST00000421670 TECPR1Q7Z6L1 1165 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 SLC41A1Q8IVJ1 513 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 GPR161Q8N6U8 529 aaKnown RBP15.67■□□□□ 0.1
DDX55-203ENST00000421670 ZBTB44Q8NCP5 570 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 GPR26Q8NDV2 337 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 FBXO36Q8NEA4 188 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 PTCD2Q8WV60 388 aaKnown RBP15.67■□□□□ 0.1
DDX55-203ENST00000421670 ZNF669Q96BR6 464 aaPredicted RBP15.67■□□□□ 0.1
DDX55-203ENST00000421670 MFSD3Q96ES6 412 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 CFAP36Q96G28 342 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 EBNA1BP2Q99848 306 aaKnown RBP15.67■□□□□ 0.1
DDX55-203ENST00000421670 C1QTNF2Q9BXJ5 285 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 NLE1Q9NVX2 485 aaPredicted RBP15.67■□□□□ 0.1
DDX55-203ENST00000421670 FKBPLQ9UIM3 349 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 MUC6Q6W4X9 2439 aa15.67■□□□□ 0.1
DDX55-203ENST00000421670 RAD51BO15315 384 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 GPR39O43194 453 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 FAM153BP0C7A2 387 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 CCR5P51681 352 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 ARSDP51689 593 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 NUBP1P53384 320 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 SGCGQ13326 291 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 FAM153CQ494X1 144 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 SETMARQ53H47 684 aaPredicted RBP15.66■□□□□ 0.1
DDX55-203ENST00000421670 FAM151BQ6UXP7 276 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 KDM7AQ6ZMT4 941 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 PELI3Q8N2H9 469 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 CADM4Q8NFZ8 388 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 STYXQ8WUJ0 223 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 LRRC39Q96DD0 335 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 FCRL3Q96P31 734 aaPredicted RBP15.66■□□□□ 0.1
DDX55-203ENST00000421670 FOXP3Q9BZS1 431 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 PHACTR1Q9C0D0 580 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 SUDS3Q9H7L9 328 aaPredicted RBP15.66■□□□□ 0.1
DDX55-203ENST00000421670 MRM3Q9HC36 420 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms