RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 MUL1Q969V5 352 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 HDAC11Q96DB2 347 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 SPATA17Q96L03 361 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 QKIQ96PU8 341 aaKnown RBP eCLIP6.11□□□□□ -1.431e-6■■■■□ 26.5
CHD2-202ENST00000420239 CDK5RAP1Q96SZ6 601 aaKnown RBP6.11□□□□□ -1.43
CHD2-202ENST00000420239 RBBP8Q99708 897 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 MCMBPQ9BTE3 642 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 MSTO1Q9BUK6 570 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 ZC3H12CQ9C0D7 883 aaKnown RBP6.11□□□□□ -1.43
CHD2-202ENST00000420239 XYLT2Q9H1B5 865 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 DHX35Q9H5Z1 703 aaKnown RBP6.11□□□□□ -1.43
CHD2-202ENST00000420239 SPAG4Q9NPE6 437 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 FBXO8Q9NRD0 319 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 SMPD3Q9NY59 655 aaPredicted RBP6.11□□□□□ -1.43
CHD2-202ENST00000420239 SLCO3A1Q9UIG8 710 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 MOSPD1Q9UJG1 213 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 AURKCQ9UQB9 309 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 EIF3LQ9Y262 564 aaKnown RBP6.11□□□□□ -1.43
CHD2-202ENST00000420239 TESMINQ9Y4I5 508 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 ANKRD31Q8N7Z5 1873 aa6.11□□□□□ -1.43
CHD2-202ENST00000420239 A0A096LPK6 155 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 RNF103-CHMP3A0A140T963 221 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 FAM172BPA6NC97 362 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 HACD1B0YJ81 288 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 RNF103O00237 685 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 NME4O00746 187 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 SLC22A1O15245 554 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 ASNA1O43681 348 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 IDH3BO43837 385 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 UGT2B11O75310 529 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 RFPL2O75678 378 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 ALX3O95076 343 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 IL7RP16871 459 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 PRKACBP22694 351 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 EEF1B2P24534 225 aaKnown RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 LRPAP1P30533 357 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CD68P34810 354 aaPredicted RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 SPRP35270 261 aaPredicted RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 EIF2DP41214 584 aaKnown RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 PGGT1BP53609 377 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CACNB3P54284 484 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 GP2P55259 537 aaKnown RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 FPGSQ05932 587 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 PIGFQ07326 219 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CBX2Q14781 532 aaPredicted RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 MAPRE2Q15555 327 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 PEAR1Q5VY43 1037 aaPredicted RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 LIPMQ5VYY2 423 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 FAM45BPQ6NSW5 357 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CASC4Q6P4E1 433 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 TBPL2Q6SJ96 375 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 TMC5Q6UXY8 1006 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 ZPBP2Q6X784 338 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 PODNQ7Z5L7 613 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 LINC00523Q86TU6 105 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 DDIASQ8IXT1 998 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 SFRP1Q8N474 314 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 KDM1BQ8NB78 822 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 FAM45AQ8TCE6 357 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CHAC2Q8WUX2 184 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 HDAC10Q969S8 669 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CENPNQ96H22 339 aaPredicted RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 YME1L1Q96TA2 773 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 MTMR12Q9C0I1 747 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 UPF3AQ9H1J1 476 aaKnown RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 C2orf40Q9H1Z8 148 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CPNE5Q9HCH3 593 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 MAGEE1Q9HCI5 957 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CHRAC1Q9NRG0 131 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 SYBUQ9NX95 663 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.1□□□□□ -1.433e-6■□□□□ 10.8
CHD2-202ENST00000420239 TXNDC16Q9P2K2 825 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 GABBR1Q9UBS5 961 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 RABL2BQ9UNT1 228 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 ANKRD6Q9Y2G4 727 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 MGAMO43451 1857 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 UBR3Q6ZT12 1888 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 FNDC1Q4ZHG4 1894 aaPredicted RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 A0A1W2PNR3 127 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 LRRIQ4A6NIV6 560 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 AQP12BA6NM10 295 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 TARM1B6A8C7 271 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 TAF4O00268 1085 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CCRL2O00421 344 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 NFIBO00712 420 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 TEX28O15482 410 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 PRPSAP2O60256 369 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 GDF9O60383 454 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 EDN1P05305 212 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 RHOQP17081 205 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 CES1P23141 567 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 MSX1P28360 303 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 ALDH4A1P30038 563 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 HADHAP40939 763 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 GPD2P43304 727 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 RPS9P46781 194 aaKnown RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 SLC26A2P50443 739 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 P2RX3P56373 397 aa6.1□□□□□ -1.43
CHD2-202ENST00000420239 SESN2P58004 480 aaPredicted RBP6.1□□□□□ -1.43
CHD2-202ENST00000420239 YBX1P67809 324 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms