RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TUBB2BQ9BVA1 445 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 SLC26A6Q9BXS9 759 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 AGXT2Q9BYV1 514 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 RBM38Q9H0Z9 239 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 UNC45AQ9H3U1 944 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 MVB12BQ9H7P6 319 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 CATSPERBQ9H7T0 1116 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 PREBQ9HCU5 417 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ECHDC1Q9NTX5 307 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 SPATS2LQ9NUQ6 558 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 TMEM51Q9NW97 253 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 PSD3Q9NYI0 1048 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 NCKIPSDQ9NZQ3 722 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 KIAA1456Q9P272 454 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 SPEF2Q9C093 1822 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 MRC1P22897 1456 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 OVOS2A0A0G2JMS6 1433 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 NCAPD2Q15021 1401 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CKAP5Q14008 2032 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 MED23Q9ULK4 1368 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 LMO7Q8WWI1 1683 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 PHRF1Q9P1Y6 1649 aaKnown RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 TYW5A2RUC4 315 aaKnown RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 FAM90A10PA6NDY2 464 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CCDC69A6NI79 296 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CBY3A6NI87 242 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CD8B2A6NJW9 211 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 MS4A18H0YCH9 400 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 H3BQV1 296 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 J3KRW8 73 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 EBAG9O00559 213 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 TNFRSF13BO14836 293 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 IKBKBO14920 756 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 ZSCAN12O43309 604 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 TOMM40O96008 361 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 IVLP07476 585 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 GALTP07902 379 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 ATP1A3P13637 1013 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 HOXB2P14652 356 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 PTPN2P17706 415 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 LMO1P25800 156 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CDC25AP30304 524 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 FMO4P31512 558 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 ELF1P32519 619 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 ARL1P40616 181 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 NR1H2P55055 460 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 ZP1P60852 638 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CCZ1BP86790 482 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CCZ1P86791 482 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 RUNX2Q13950 521 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 VEPH1Q14D04 833 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 RRS1Q15050 365 aaKnown RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 NECTIN1Q15223 517 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 TAF7Q15545 349 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 KRT24Q2M2I5 525 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 PRICKLE4Q2TBC4 344 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 PLEKHO1Q53GL0 409 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 CCDC158Q5M9N0 1113 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 SERTAD4-AS1Q5TG53 156 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 OTUD1Q5VV17 481 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 AWAT2Q6E213 333 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 NAA16Q6N069 864 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 CWC27Q6UX04 472 aaKnown RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 MCM10Q7L590 875 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 G2E3Q7L622 706 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 PPP1R42Q7Z4L9 355 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 TECPR1Q7Z6L1 1165 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 TBC1D26Q86UD7 250 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 GPAT4Q86UL3 456 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 UNC5CLQ8IV45 518 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CADM3Q8N126 398 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 TEX45Q8NA69 505 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 PCYOX1LQ8NBM8 494 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 MNS1Q8NEH6 495 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 MCPH1Q8NEM0 835 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 NFKBIDQ8NI38 313 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 TMEM163Q8TC26 289 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 NSMCE1Q8WV22 266 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 GTF3C6Q969F1 213 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 TMEM18Q96B42 140 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 LBHD1Q9BQE6 289 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 NPFFR1Q9GZQ6 430 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 USP44Q9H0E7 712 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 SLC25A18Q9H1K4 315 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 CDT1Q9H211 546 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 YY1AP1Q9H869 796 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 PLAC1Q9HBJ0 212 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 SNTG1Q9NSN8 517 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 KCND2Q9NZV8 630 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 MPP6Q9NZW5 540 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 ZNF69Q9UC07 566 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 RCOR1Q9UKL0 485 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 ZNF215Q9UL58 517 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.76□□□□□ -1.975e-8■■■□□ 14.9
VPS41-206ENST00000418457 SRPRBQ9Y5M8 271 aaKnown RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 ABCC6O95255 1503 aa2.76□□□□□ -1.97
VPS41-206ENST00000418457 NPHP4O75161 1426 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 ZNF142P52746 1687 aaPredicted RBP2.76□□□□□ -1.97
VPS41-206ENST00000418457 PLEKHG1Q9ULL1 1385 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 LAMA4Q16363 1823 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms