RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GLP2RO95838 553 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 SLC5A2P31639 672 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 FRG1Q14331 258 aaKnown RBP11.89□□□□□ -0.51
LIMK1-202ENST00000418310 MAPRE2Q15555 327 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 BRMS1LQ5PSV4 323 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 SPRYD7Q5W111 196 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 FBXL22Q6P050 247 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 PBXIP1Q96AQ6 731 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 TSPAN17Q96FV3 270 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 SMOC2Q9H3U7 446 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 SLAMF8Q9P0V8 285 aa11.89□□□□□ -0.51
LIMK1-202ENST00000418310 A0A0D9SEW6 157 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 CACNG3O60359 315 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 EEF1DP29692 281 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 GALK1P51570 392 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 NDST2P52849 883 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 TMED1Q13445 227 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 POLD3Q15054 466 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 ACAP2Q15057 778 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 TSNQ15631 228 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 LZTR1Q8N653 840 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 ZC3H15Q8WU90 426 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 IRGQQ8WZA9 623 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 IMP4Q96G21 291 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 PREBQ9HCU5 417 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 SUCOQ9UBS9 1254 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 CD3EAPO15446 510 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 KPNA6O60684 536 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 MMP2P08253 660 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 IMPDH1P20839 514 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 LEPRP48357 1165 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 SAMD4BQ5PRF9 694 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 PAQR3Q6TCH7 311 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 CD300LGQ6UXG3 332 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 LPCAT2Q7L5N7 544 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 AHI1Q8N157 1196 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 OR7D4Q8NG98 312 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 GIPC2Q8TF65 315 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 SNRNP27Q8WVK2 155 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 FBXL20Q96IG2 436 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 TEX37Q96LM6 180 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 TRMT13Q9NUP7 481 aaKnown RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 GALPQ9UBC7 116 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 IKZF3Q9UKT9 509 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 GIT1Q9Y2X7 761 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 CDC7O00311 574 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 TRIM24O15164 1050 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 HTRA2O43464 458 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 RAMP2O60895 175 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 PEX11BO96011 259 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 IGLV3-25P01717 112 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 ASLP04424 464 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 SCNN1BP51168 640 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 PRKCQQ04759 706 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 MANEALQ5VSG8 457 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 RNF217Q8TC41 542 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 NCSTNQ92542 709 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 RMND5BQ96G75 393 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-202ENST00000418310 SERPINB11Q96P15 392 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 ZYG11BQ9C0D3 744 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 RNF112Q9ULX5 631 aa11.88□□□□□ -0.51
LIMK1-202ENST00000418310 NPEPPSL1A6NEC2 478 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 NT5C1B-RDH14C9J2C7 533 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 AZIN1O14977 448 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 DNAJB13P59910 316 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 TUSC3Q13454 348 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 PLCL1Q15111 1095 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CYP51A1Q16850 503 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 TIGD2Q4W5G0 525 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 OTUD3Q5T2D3 398 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 LARP4Q71RC2 724 aaKnown RBP eCLIP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 EGFL6Q8IUX8 553 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CHERPQ8IWX8 916 aaKnown RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 PAF1Q8N7H5 531 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 UBXN10Q96LJ8 280 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 EFHD1Q9BUP0 239 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 TUBB1Q9H4B7 451 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 MAP10Q9P2G4 905 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 IQCF5A8MTL0 148 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 GPR182O15218 404 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 LDB2O43679 373 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 PCNAP12004 261 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CD1DP15813 335 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 ITGB6P18564 788 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 DNAJB2P25686 324 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 ADSLP30566 484 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 NFYCQ13952 458 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 RFTN1Q14699 578 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 RBBP7Q16576 425 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 AAK1Q2M2I8 961 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 ZIK1Q3SY52 487 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 UGT3A1Q6NUS8 523 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 RAB44Q7Z6P3 723 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CLVS1Q8IUQ0 354 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms