RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PACSIN2Q9UNF0 486 aaPredicted RBP18.06■□□□□ 0.48
VCP-202ENST00000417448 FARP1Q9Y4F1 1045 aaPredicted RBP18.06■□□□□ 0.48
VCP-202ENST00000417448 WASF2Q9Y6W5 498 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 ARHGAP42A6NI28 874 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 TMCC1O94876 653 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 FTCDO95954 541 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 RPLP0P05388 317 aaKnown RBP18.05■□□□□ 0.48
VCP-202ENST00000417448 PTMAP06454 111 aaKnown RBP18.05■□□□□ 0.48
VCP-202ENST00000417448 ANXA6P08133 673 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 TSHRP16473 764 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 DYNLT1P63172 113 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 NCBP2-AS2Q69YL0 99 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 NPNTQ6UXI9 565 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 RYBPQ8N488 228 aaPredicted RBP18.05■□□□□ 0.48
VCP-202ENST00000417448 FAM26EQ8N5C1 309 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 LRRC57Q8N9N7 239 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 KIAA1524Q8TCG1 905 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 FEM1CQ96JP0 617 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 EXOC2Q96KP1 924 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 CCDC114Q96M63 670 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 LENG8Q96PV6 779 aaPredicted RBP18.05■□□□□ 0.48
VCP-202ENST00000417448 RNF157Q96PX1 679 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 C1QTNF2Q9BXJ5 285 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 CPEB1Q9BZB8 566 aaKnown RBP18.05■□□□□ 0.48
VCP-202ENST00000417448 ADNPQ9H2P0 1102 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 LZTFL1Q9NQ48 299 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 GULP1Q9UBP9 304 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 GGT7Q9UJ14 662 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 CAPN6Q9Y6Q1 641 aa18.05■□□□□ 0.48
VCP-202ENST00000417448 ANKRD17O75179 2603 aaKnown RBP18.05■□□□□ 0.48
VCP-202ENST00000417448 TTC24A2A3L6 582 aaPredicted RBP18.04■□□□□ 0.48
VCP-202ENST00000417448 IGLON5A6NGN9 336 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 C9orf172C9J069 976 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 INSIG1O15503 277 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 PRAMEF11O60813 436 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 CASRP41180 1078 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 ZNF135P52742 658 aaPredicted RBP18.04■□□□□ 0.48
VCP-202ENST00000417448 GBE1Q04446 702 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 ADCY2Q08462 1091 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 SLC10A2Q12908 348 aaPredicted RBP18.04■□□□□ 0.48
VCP-202ENST00000417448 LRRC38Q5VT99 294 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 KAZNQ674X7 775 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 ESRP1Q6NXG1 681 aaKnown RBP18.04■□□□□ 0.48
VCP-202ENST00000417448 AADACL2Q6P093 401 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 RFX6Q8HWS3 928 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 MAP7D3Q8IWC1 876 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 ARL10Q8N8L6 244 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 FAF2Q96CS3 445 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 PPP1R16AQ96I34 528 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 TBATAQ96M53 351 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 ZNF670Q9BS34 389 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 SLC12A9Q9BXP2 914 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 PDFQ9HBH1 243 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 SIRPGQ9P1W8 387 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 UBA2Q9UBT2 640 aaPredicted RBP18.04■□□□□ 0.48
VCP-202ENST00000417448 CENPEQ02224 2701 aa18.04■□□□□ 0.48
VCP-202ENST00000417448 TMX2-CTNND1H3BSU7 103 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 ITGB7P26010 798 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 POLE2P56282 527 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 SLC20A2Q08357 652 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 KCNAB2Q13303 367 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 TCEA2Q15560 299 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 ODF2Q5BJF6 829 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 CARD16Q5EG05 197 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 PARS2Q7L3T8 475 aaKnown RBP18.03■□□□□ 0.48
VCP-202ENST00000417448 USP7Q93009 1102 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 HERPUD2Q9BSE4 406 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 SP110Q9HB58 689 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 DDX56Q9NY93 547 aaKnown RBP18.03■□□□□ 0.48
VCP-202ENST00000417448 RCOR3Q9P2K3 495 aaPredicted RBP18.03■□□□□ 0.48
VCP-202ENST00000417448 HECAQ9UBI9 543 aaPredicted RBP18.03■□□□□ 0.48
VCP-202ENST00000417448 LHX3Q9UBR4 397 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 ITM2BQ9Y287 266 aa18.03■□□□□ 0.48
VCP-202ENST00000417448 PSTPIP1O43586 416 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 AP1G1O43747 822 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 IGFALSP35858 605 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 ABL2P42684 1182 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 RGRP47804 291 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 CCNHP51946 323 aaPredicted RBP18.02■□□□□ 0.48
VCP-202ENST00000417448 RHOAP61586 193 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 PAFAH1B3Q15102 231 aaKnown RBP18.02■□□□□ 0.48
VCP-202ENST00000417448 BORAQ6PGQ7 559 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 SPOCD1Q6ZMY3 1216 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 NT5DC3Q86UY8 548 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 CCDC50Q8IVM0 306 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 LZTR1Q8N653 840 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 PLD5Q8N7P1 536 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 JPH3Q8WXH2 748 aaPredicted RBP18.02■□□□□ 0.48
VCP-202ENST00000417448 ANP32BQ92688 251 aaKnown RBP18.02■□□□□ 0.48
VCP-202ENST00000417448 CENPTQ96BT3 561 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 PDLIM2Q96JY6 352 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 TMEM74Q96NL1 305 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 HEMGNQ9BXL5 484 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 MAK16Q9BXY0 300 aaKnown RBP18.02■□□□□ 0.48
VCP-202ENST00000417448 SLC13A1Q9BZW2 595 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 LRRN3Q9H3W5 708 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 ZDHHC6Q9H6R6 413 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 SAE1Q9UBE0 346 aaPredicted RBP18.02■□□□□ 0.48
VCP-202ENST00000417448 PPP2R2CQ9Y2T4 447 aa18.02■□□□□ 0.48
VCP-202ENST00000417448 HEY1Q9Y5J3 304 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms