RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 FEZ2Q9UHY8 353 aaPredicted RBP23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 PCDHGB2Q9Y5G2 931 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 PLXNA2O75051 1894 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 A0A0U1RQS6 177 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 A0A1B0GTQ1 180 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 ERI2A8K979 691 aaKnown RBP23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 PYGLP06737 847 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 C1SP09871 688 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 PIRTP0C851 137 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 TSHRP16473 764 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 ADRA1AP35348 466 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 RXRGP48443 463 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 DPTQ07507 201 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 LYSMD3Q7Z3D4 306 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 DGLUCYQ7Z3D6 616 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 TMC3Q7Z5M5 1100 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 KLHDC8BQ8IXV7 354 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 AP2M1Q96CW1 435 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 TBL1YQ9BQ87 522 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 AP1M1Q9BXS5 423 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 CDH19Q9H159 772 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 SHOC2Q9UQ13 582 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 FNDC3AQ9Y2H6 1198 aaKnown RBP23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 ZNF711Q9Y462 761 aa23.06■■□□□ 1.28
SMARCB1-205ENST00000417137 E7EVH7 732 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 CACNB4O00305 520 aaPredicted RBP23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 PDE2AO00408 941 aaPredicted RBP23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 ZNF185O15231 689 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 HOXC4P09017 264 aaPredicted RBP23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 TEAD1P28347 426 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 TRIM23P36406 574 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 CHRNA4P43681 627 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 KCNJ1P48048 391 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 SPINT3P49223 89 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 PUM1Q14671 1186 aaKnown RBP eCLIP23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 PRAMEF14Q5SWL7 426 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 PARGQ86W56 976 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 SLC22A18ASQ8N1D0 253 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 C17orf53Q8N3J3 647 aaPredicted RBP23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 PLA2G15Q8NCC3 412 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 ABCG8Q9H221 673 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 FAM83DQ9H4H8 585 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 PCDH15Q96QU1 1955 aa23.05■■□□□ 1.28
SMARCB1-205ENST00000417137 PCDHGA12O60330 932 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 KELP23276 732 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 CASQ1P31415 396 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 LMAN1P49257 510 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 ETF1P62495 437 aaKnown RBP23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 FZD2Q14332 565 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 CYP1B1Q16678 543 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 KCTD11Q693B1 232 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 RAET1GQ6H3X3 334 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 LINC00523Q86TU6 105 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 BLOC1S5Q8TDH9 187 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 WDR26Q9H7D7 661 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 ETNK1Q9HBU6 452 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 ARNT2Q9HBZ2 717 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 RNF14Q9UBS8 474 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 CD84Q9UIB8 345 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 OR1A2Q9Y585 309 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 CACNA1EQ15878 2313 aa23.04■■□□□ 1.28
SMARCB1-205ENST00000417137 AP2A1O95782 977 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 RPL22P35268 128 aaKnown RBP23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 HMGCLP35914 325 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 PAFAH1B1P43034 410 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 GPR1P46091 355 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 NFATC4Q14934 902 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 FAXCQ5TGI0 409 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 MACC1Q6ZN28 852 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 TAB3Q8N5C8 712 aaPredicted RBP23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 PDCD7Q8N8D1 485 aaKnown RBP23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 APOL2Q9BQE5 337 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 RAB6BQ9NRW1 208 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 PHPT1Q9NRX4 125 aaPredicted RBP23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 DNAJC28Q9NX36 388 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 DLL3Q9NYJ7 618 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 SPO11Q9Y5K1 396 aa23.03■■□□□ 1.28
SMARCB1-205ENST00000417137 DOCK9Q9BZ29 2069 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 FRYLO94915 3013 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 H3BM21 787 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 SLC4A1P02730 911 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 ETS1P14921 441 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 COILP38432 576 aaPredicted RBP23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 KIAA1024LP59773 190 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 HNRNPKP61978 463 aaKnown RBP eCLIP23.02■■□□□ 1.284e-10■■■■□ 21
SMARCB1-205ENST00000417137 SPARCL1Q14515 664 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 INAVAQ3KP66 663 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 ZDHHC20Q5W0Z9 365 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 CCDC137Q6PK04 289 aaKnown RBP23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 RFLNAQ6ZTI6 216 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 GLT6D1Q7Z4J2 308 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 GRK7Q8WTQ7 553 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 BTN2A2Q8WVV5 523 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 SCAMP4Q969E2 229 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 RIOK2Q9BVS4 552 aaKnown RBP23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 SMARCAL1Q9NZC9 954 aa23.02■■□□□ 1.28
SMARCB1-205ENST00000417137 C2orf81A6NN90 581 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 PHF2O75151 1096 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 PPFIA2O75334 1257 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 GAS8O95995 478 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms