RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 MAXP61244 160 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 CDK3Q00526 305 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 KLHL30Q0D2K2 578 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 ILF3Q12906 894 aaKnown RBP eCLIP14.8□□□□□ -0.04
RPS28-201ENST00000417088 NR1D2Q14995 579 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 AMZ1Q400G9 498 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 MAP9Q49MG5 647 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 BOLA3Q53S33 107 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 CCDC183Q5T5S1 534 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 ZNF574Q6ZN55 896 aaPredicted RBP14.8□□□□□ -0.04
RPS28-201ENST00000417088 Q6ZVL8 140 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 PIM3Q86V86 326 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 DTX1Q86Y01 620 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 TRIM11Q96F44 468 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 SCRN2Q96FV2 425 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 CSPG4P5Q96PW8 444 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 MCCC1Q96RQ3 725 aaPredicted RBP14.8□□□□□ -0.04
RPS28-201ENST00000417088 ISCUQ9H1K1 167 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 MRPL47Q9HD33 250 aaKnown RBP14.8□□□□□ -0.04
RPS28-201ENST00000417088 SEPT10Q9P0V9 454 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 SUFUQ9UMX1 484 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 ST14Q9Y5Y6 855 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 MYO18BQ8IUG5 2567 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 A0A1W2PQC6 194 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 RHPN2P1A8MT19 583 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 PSMD11O00231 422 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 PGLSO95336 258 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 ECEL1O95672 775 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 MYBL1P10243 752 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 RARAP10276 462 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 SKILP12757 684 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 CCL4P13236 92 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 TEAD1P28347 426 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 CD1CP29017 333 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 ALDH4A1P30038 563 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 POLD2P49005 469 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 CTBSQ01459 385 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 RALGPS1Q5JS13 557 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 TXNRD3NBQ6F5E7 133 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 RAET1GQ6H3X3 334 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 TECPR1Q7Z6L1 1165 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 TSPAN33Q86UF1 283 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 VASH2Q86V25 355 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 BBS5Q8N3I7 341 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 PATE1Q8WXA2 126 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 HSPH1Q92598 858 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 NUDT22Q9BRQ3 303 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.79□□□□□ -0.04
RPS28-201ENST00000417088 SLC17A4Q9Y2C5 497 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 PPIL1Q9Y3C6 166 aa14.79□□□□□ -0.04
RPS28-201ENST00000417088 TLN1Q9Y490 2541 aaKnown RBP14.79□□□□□ -0.04
RPS28-201ENST00000417088 A0A0U1RQS6 177 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 GOLGA6CA6NDK9 693 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 GOLGA6BA6NDN3 693 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 SLC28A2O43868 658 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 ITGB2P05107 769 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 IVLP07476 585 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 GOLGA6DP0CG33 693 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 CTPS1P17812 591 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 WT1P19544 449 aaPredicted RBP14.78□□□□□ -0.04
RPS28-201ENST00000417088 NFKBIAP25963 317 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 ADCY8P40145 1251 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 MMP13P45452 471 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 CDH6P55285 790 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 CLPPQ16740 277 aaPredicted RBP14.78□□□□□ -0.04
RPS28-201ENST00000417088 ANO6Q4KMQ2 910 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 FILIP1LQ4L180 1135 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 MANEAQ5SRI9 462 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 ARMC12Q5T9G4 340 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 MARC1Q5VT66 337 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 SLC30A9Q6PML9 568 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 XKR5Q6UX68 686 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 RFLNAQ6ZTI6 216 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 NAGSQ8N159 534 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 ATPAF2Q8N5M1 289 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 NSMCE1Q8WV22 266 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 PIH1D2Q8WWB5 315 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 EXTL1Q92935 676 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 SCARF2Q96GP6 870 aaPredicted RBP14.78□□□□□ -0.04
RPS28-201ENST00000417088 NAP1L5Q96NT1 182 aaPredicted RBP14.78□□□□□ -0.04
RPS28-201ENST00000417088 BPIFA3Q9BQP9 254 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 B3GNT4Q9C0J1 378 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 NAT10Q9H0A0 1025 aaKnown RBP14.78□□□□□ -0.04
RPS28-201ENST00000417088 PCDH18Q9HCL0 1135 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 GOLGA6AQ9NYA3 693 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 AKAP7Q9P0M2 348 aaPredicted RBP14.78□□□□□ -0.04
RPS28-201ENST00000417088 PLEKHM1Q9Y4G2 1056 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 PCDHB11Q9Y5F2 797 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 PCDHGA4Q9Y5G9 962 aa14.78□□□□□ -0.04
RPS28-201ENST00000417088 IGHV5-10-1A0A0J9YXX1 117 aa14.77□□□□□ -0.05
RPS28-201ENST00000417088 A0A1B0GTH6 734 aa14.77□□□□□ -0.05
RPS28-201ENST00000417088 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.77□□□□□ -0.05
RPS28-201ENST00000417088 HGSO14964 777 aaPredicted RBP14.77□□□□□ -0.05
RPS28-201ENST00000417088 PPM1DO15297 605 aa14.77□□□□□ -0.05
RPS28-201ENST00000417088 ZW10O43264 779 aa14.77□□□□□ -0.05
RPS28-201ENST00000417088 SOD1P00441 154 aa14.77□□□□□ -0.05
RPS28-201ENST00000417088 PDHA1P08559 390 aa14.77□□□□□ -0.05
RPS28-201ENST00000417088 CD82P27701 267 aa14.77□□□□□ -0.05
RPS28-201ENST00000417088 GPR3P46089 330 aa14.77□□□□□ -0.05
RPS28-201ENST00000417088 DPTQ07507 201 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms