RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 URODP06132 367 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 MC4RP32245 332 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 BEX3Q00994 111 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 PLA2G4EQ3MJ16 856 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 FNDC3BQ53EP0 1204 aaKnown RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 CPT1BQ92523 772 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TUBGCP5Q96RT8 1024 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 GAD1Q99259 594 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 BHLHE41Q9C0J9 482 aaPredicted RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 SLC17A6Q9P2U8 582 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ZNF490Q9ULM2 529 aaPredicted RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 SNX7Q9UNH6 387 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 IQGAP1P46940 1657 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 hCG_2039718K7EN88 272 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TPTEP56180 551 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TAS2R41P59536 307 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 LSM12Q3MHD2 195 aaKnown RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 INTS11Q5TA45 600 aaKnown RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 BHLHB9Q6PI77 547 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ZPBP2Q6X784 338 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 GPR180Q86V85 440 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ZNF655Q8N720 491 aaPredicted RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 TWIST2Q8WVJ9 160 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 RAPGEFL1Q9UHV5 662 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 SLC27A5Q9Y2P5 690 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 BAZ2BQ9UIF8 2168 aaKnown RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 MEGF6O75095 1541 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 RGS10O43665 173 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ITPKAP23677 461 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TOMM20Q15388 145 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 GPR158Q5T848 1215 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ERICH5Q6P6B1 374 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 FRMD7Q6ZUT3 714 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 BBS12Q6ZW61 710 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 FAM98AQ8NCA5 519 aaKnown RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 DNERQ8NFT8 737 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 SHC3Q92529 594 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 AP3S1Q92572 193 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 KCTD15Q96SI1 283 aaPredicted RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 HBEGFQ99075 208 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 CHIAQ9BZP6 476 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 CHRAC1Q9NRG0 131 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TMCO1Q9UM00 188 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 C1orf167Q5SNV9 1468 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 LRRIQ1Q96JM4 1722 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 NWD1Q149M9 1564 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TPST2O60704 377 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ACADMP11310 421 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 EFNA1P20827 205 aaPredicted RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 FMO3P31513 532 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 CAPGP40121 348 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ECT2LQ008S8 904 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 EIF2B5Q13144 721 aaKnown RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 PRKG2Q13237 762 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 BIKQ13323 160 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ACVR2BQ13705 512 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 CYP2A13Q16696 494 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 C6orf183Q5T699 404 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 LRRC38Q5VT99 294 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 PIGZQ86VD9 579 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 AADATQ8N5Z0 425 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 OR4L1Q8NH43 312 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 STARD8Q92502 1023 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 CXorf21Q9HAI6 301 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 C11orf16Q9NQ32 467 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 MARCH2Q9P0N8 246 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TECPR2O15040 1411 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 THRBP10828 461 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TSHRP16473 764 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 PTPN3P26045 913 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 SCNN1GP51170 649 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 RABGGTBP53611 331 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 LIN54Q6MZP7 749 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 TRIM40Q6P9F5 258 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 CFAP52Q8N1V2 620 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 ACO2Q99798 780 aaKnown RBP12.04□□□□□ -0.48
UBR4-205ENST00000417040 EBF4Q9BQW3 602 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 PCDH18Q9HCL0 1135 aa12.04□□□□□ -0.48
UBR4-205ENST00000417040 IL1R1P14778 569 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ITGA2P17301 1181 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 PPP2R2BQ00005 443 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 SMARCB1Q12824 385 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 TYSND1Q2T9J0 566 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 HECTD2Q5U5R9 776 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 SULT1C3Q6IMI6 304 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 FAM171BQ6P995 826 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 RHBDF2Q6PJF5 856 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 CXXC5Q7LFL8 322 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 ATL1Q8WXF7 558 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 GLT1D1Q96MS3 346 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 TSSK3Q96PN8 268 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 TBL1XO60907 577 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 TRIM3O75382 744 aaPredicted RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 PTGIRP43119 386 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 LIPEQ05469 1076 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ACSBG2Q5FVE4 666 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 PIK3R6Q5UE93 754 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 RETSATQ6NUM9 610 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 PIWIL4Q7Z3Z4 852 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 CPNE8Q86YQ8 564 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms