RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 Q6ZVL8 140 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 USP53Q70EK8 1073 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 USP45Q70EL2 814 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 TMPRSS9Q7Z410 1059 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 HSD11B1LQ7Z5J1 315 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 PIM3Q86V86 326 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 SCRN2Q96FV2 425 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 FRMD8Q9BZ67 464 aaPredicted RBP14.42□□□□□ -0.1
PAF1-202ENST00000416728 ISCUQ9H1K1 167 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 RDH14Q9HBH5 336 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 AKAP7Q9P0M2 348 aaPredicted RBP14.42□□□□□ -0.1
PAF1-202ENST00000416728 TAAR2Q9P1P5 351 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 SUFUQ9UMX1 484 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 A0A1B0GTH6 734 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 NPIPB15A6NHN6 443 aaPredicted RBP14.41□□□□□ -0.1
PAF1-202ENST00000416728 PGLSO95336 258 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 FUCA1P04066 466 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 FGF1P05230 155 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 KRT10P13645 584 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 ALDH4A1P30038 563 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 ETV5P41161 510 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 MAPK10P53779 464 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 TDRD12Q587J7 1177 aaKnown RBP14.41□□□□□ -0.1
PAF1-202ENST00000416728 SLC30A9Q6PML9 568 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 ZNF438Q7Z4V0 828 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 TSPAN33Q86UF1 283 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 C17orf82Q86X59 251 aaPredicted RBP14.41□□□□□ -0.1
PAF1-202ENST00000416728 NRROSQ86YC3 692 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 CBARPQ8N350 705 aaPredicted RBP14.41□□□□□ -0.1
PAF1-202ENST00000416728 TEKT4Q8WW24 435 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 USP7Q93009 1102 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 SGF29Q96ES7 293 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 NAP1L5Q96NT1 182 aaPredicted RBP14.41□□□□□ -0.1
PAF1-202ENST00000416728 MCCC1Q96RQ3 725 aaPredicted RBP14.41□□□□□ -0.1
PAF1-202ENST00000416728 SEMA6CQ9H3T2 930 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 PCDH18Q9HCL0 1135 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 FOXJ2Q9P0K8 574 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 TMEM63CQ9P1W3 806 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 PCDHB11Q9Y5F2 797 aa14.41□□□□□ -0.1
PAF1-202ENST00000416728 B4GAT1O43505 415 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 ECEL1O95672 775 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 AK4P27144 223 aaPredicted RBP14.4□□□□□ -0.1
PAF1-202ENST00000416728 TEAD1P28347 426 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 OR1D5P58170 312 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 SRSF6Q13247 344 aaKnown RBP14.4□□□□□ -0.1
PAF1-202ENST00000416728 PEX6Q13608 980 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 KRT81Q14533 505 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 C16orf72Q14CZ0 275 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 CLPPQ16740 277 aaPredicted RBP14.4□□□□□ -0.1
PAF1-202ENST00000416728 MANEAQ5SRI9 462 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 TMEM164Q5U3C3 297 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 TXNRD3NBQ6F5E7 133 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 ZFAND4Q86XD8 727 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 NDUFAF2Q8N183 169 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 CDH19Q9H159 772 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 NT5MQ9NPB1 228 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 SLC17A4Q9Y2C5 497 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 ATMQ13315 3056 aa14.4□□□□□ -0.1
PAF1-202ENST00000416728 AHCTF1Q8WYP5 2266 aa14.4□□□□□ -0.11
PAF1-202ENST00000416728 C9orf172C9J069 976 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 SERPINC1P01008 464 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 IVLP07476 585 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 CTPS1P17812 591 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 CD82P27701 267 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 ADCY8P40145 1251 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 GPR1P46091 355 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 POLD2P49005 469 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 ZNF165P49910 485 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 CTBSQ01459 385 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 SLC25A11Q02978 314 aaKnown RBP14.39□□□□□ -0.11
PAF1-202ENST00000416728 DPTQ07507 201 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 NR1D2Q14995 579 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 PTPRRQ15256 657 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 FIGNQ5HY92 759 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 DOK6Q6PKX4 331 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 LRRC49Q8IUZ0 686 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 NIPA2Q8N8Q9 360 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 PTCD2Q8WV60 388 aaKnown RBP14.39□□□□□ -0.11
PAF1-202ENST00000416728 PIH1D2Q8WWB5 315 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 BTBD6Q96KE9 485 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 SEMA3CQ99985 751 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 NUDT22Q9BRQ3 303 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 ARHGAP9Q9BRR9 750 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 B3GNT4Q9C0J1 378 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 THAP2Q9H0W7 228 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 IP6K2Q9UHH9 426 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 ANAPC7Q9UJX3 599 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 PPIL1Q9Y3C6 166 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
PAF1-202ENST00000416728 CFAP46Q8IYW2 2715 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 COL6A6A6NMZ7 2263 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 ANKRD36A6QL64 1941 aa14.39□□□□□ -0.11
PAF1-202ENST00000416728 HGSO14964 777 aaPredicted RBP14.38□□□□□ -0.11
PAF1-202ENST00000416728 SLC28A2O43868 658 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 ITGB2P05107 769 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 PDHA1P08559 390 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 ACTR1BP42025 376 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 GPR3P46089 330 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 ACTR1AP61163 376 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 ITKQ08881 620 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms