RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 DDX28Q9NUL7 540 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 FBXO28Q9NVF7 368 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 HYPKQ9NX55 129 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 WSB2Q9NYS7 404 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 KCMF1Q9P0J7 381 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 MARCH2Q9P0N8 246 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 COPG2Q9UBF2 871 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 DBF4Q9UBU7 674 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CD207Q9UJ71 328 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 HAO1Q9UJM8 370 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ADAMTS6Q9UKP5 1117 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ANGEL1Q9UNK9 670 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 USP22Q9UPT9 525 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PHF24Q9UPV7 400 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC9A8Q9Y2E8 581 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 KANK1Q14678 1352 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CARMIL1Q5VZK9 1371 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 NCAPD2Q15021 1401 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM240BA0A1B0GVZ2 78 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 C2orf78A6NCI8 922 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 TCAF2A6NFQ2 919 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 MBD3L5A6NJ08 208 aaPredicted RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 BECN2A8MW95 431 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 K7EQM0 130 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 GPR25O00155 361 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CYR61O00622 381 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 HS3ST1O14792 307 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 POLR1CO15160 346 aaPredicted RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 DYNC1LI2O43237 492 aaPredicted RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PAPSS1O43252 624 aaPredicted RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 RGS10O43665 173 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PRAMEF4O60810 478 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC25A12O75746 678 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 RAD17O75943 681 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 SEC24DO94855 1032 aaPredicted RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 SLCO2B1O94956 709 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 MOCS3O95396 460 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 VNN2O95498 520 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC16A8O95907 504 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 MBD3O95983 291 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CLPTM1O96005 669 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ASNSP08243 561 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CYP21A2P08686 494 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 KRT19P08727 400 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 UQCRFS1P1P0C7P4 283 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ZCCHC18P0CG32 403 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 G6PDP11413 515 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ODC1P11926 461 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 RPA2P15927 270 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PRKACAP17612 351 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 DDX5P17844 614 aaKnown RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 TNNI3P19429 210 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 EEF1B2P24534 225 aaKnown RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 FPR2P25090 351 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PON1P27169 355 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CDC25CP30307 473 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 NMT1P30419 496 aaKnown RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PKLRP30613 574 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 RRM2P31350 389 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 TRIM23P36406 574 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 SPAM1P38567 509 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 IGHMBP2P38935 993 aaKnown RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ETV5P41161 510 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CASRP41180 1078 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 KIR3DL1P43629 444 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CDKN1BP46527 198 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 RAP1GAPP47736 663 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 KCNJ1P48048 391 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 NDUFV1P49821 464 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ENTPD1P49961 510 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ARHGDIBP52566 201 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ATP12AP54707 1039 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 AIF1P55008 147 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PRMT2P55345 433 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 TIRAPP58753 221 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ARPC4P59998 168 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 GALK2Q01415 458 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 OTUD4Q01804 1114 aaKnown RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 SLFN5Q08AF3 891 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 DMPKQ09013 629 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 SPP2Q13103 211 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PPIL2Q13356 520 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 KCNAB1Q14722 419 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 NOLC1Q14978 699 aaKnown RBP eCLIP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 MAPRE2Q15555 327 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 USF2Q15853 346 aaPredicted RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 SNCBQ16143 134 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PDK4Q16654 411 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CDO1Q16878 200 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 KRT24Q2M2I5 525 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ASTE1Q2TB18 679 aaPredicted RBP3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 KLHL40Q2TBA0 621 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF750Q32MQ0 723 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 P3H1Q32P28 736 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PCGF3Q3KNV8 242 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 MGAT5BQ3V5L5 792 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CBWD6Q4V339 395 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 PLA1AQ53H76 456 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 C19orf54Q5BKX5 351 aa3.14□□□□□ -1.91
CTDSPL-203ENST00000416688 CBWD3Q5JTY5 395 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms