RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 RHOXF2Q9BQY4 288 aa13.66□□□□□ -0.22
CPNE1-209ENST00000415920 TM7SF3Q9NS93 570 aa13.66□□□□□ -0.22
CPNE1-209ENST00000415920 FBXL12Q9NXK8 326 aa13.66□□□□□ -0.22
CPNE1-209ENST00000415920 SCML1Q9UN30 329 aa13.66□□□□□ -0.22
CPNE1-209ENST00000415920 ITM2BQ9Y287 266 aa13.66□□□□□ -0.22
CPNE1-209ENST00000415920 RAXQ9Y2V3 346 aa13.66□□□□□ -0.22
CPNE1-209ENST00000415920 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 TCRBV7S3A2A0A539 114 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 CAPN8A6NHC0 703 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 GOLGA8CPA6NN73 597 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 FZD6O60353 706 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 SEC31AO94979 1220 aaKnown RBP13.65□□□□□ -0.22
CPNE1-209ENST00000415920 AGTP01019 485 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 FGF1P05230 155 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 ALPIP09923 528 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 PIRTP0C851 137 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 HLA-DPA1P20036 260 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 NFKBIAP25963 317 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 ITGA8P53708 1063 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 SEMG2Q02383 582 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 GUCY2DQ02846 1103 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 MTM1Q13496 603 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 SLC1A5Q15758 541 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 KIF19Q2TAC6 998 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 SIRPB2Q5JXA9 342 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 PIP5KL1Q5T9C9 394 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 RNASEH2BQ5TBB1 312 aaKnown RBP13.65□□□□□ -0.22
CPNE1-209ENST00000415920 KCTD11Q693B1 232 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 ERAP2Q6P179 960 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-209ENST00000415920 PDZD3Q86UT5 571 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 NDUFAF2Q8N183 169 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 DNAAF3Q8N9W5 541 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 OR52K1Q8NGK4 314 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 HNRNPLLQ8WVV9 542 aaKnown RBP13.65□□□□□ -0.22
CPNE1-209ENST00000415920 SNX19Q92543 992 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 TRIB3Q96RU7 358 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 ERP44Q9BS26 406 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 ZDHHC5Q9C0B5 715 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 CCDC86Q9H6F5 360 aaKnown RBP13.65□□□□□ -0.22
CPNE1-209ENST00000415920 DKK3Q9UBP4 350 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 TPX2Q9ULW0 747 aaKnown RBP13.65□□□□□ -0.22
CPNE1-209ENST00000415920 NCKAP1Q9Y2A7 1128 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 SNX11Q9Y5W9 270 aa13.65□□□□□ -0.22
CPNE1-209ENST00000415920 CABIN1Q9Y6J0 2220 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 ACACAQ13085 2346 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 FAM149AA5PLN7 773 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 FAM47DPA6NHR8 397 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 NEMP1O14524 444 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 NDC80O14777 642 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 DKK1O94907 266 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 PRLP01236 227 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 OXTRP30559 389 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 ADRA1AP35348 466 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 ADPRHP54922 357 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 RPL26P61254 145 aaKnown RBP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 POLR2LP62875 67 aaKnown RBP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 ELP6Q0PNE2 266 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 SFSWAPQ12872 951 aaKnown RBP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 SEPT6Q14141 434 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 QPCTQ16769 361 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 UGP2Q16851 508 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 DBX2Q6ZNG2 339 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 USP30Q70CQ3 517 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 PCGF5Q86SE9 256 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 LINC00523Q86TU6 105 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 TTC7BQ86TV6 843 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 KLHDC8BQ8IXV7 354 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 BLOC1S5Q8TDH9 187 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 PIH1D2Q8WWB5 315 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 CRELD1Q96HD1 420 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 BBC3Q96PG8 261 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 SMIM14Q96QK8 99 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 HDAC8Q9BY41 377 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 PCDH12Q9NPG4 1184 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 GGT7Q9UJ14 662 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 FZD4Q9ULV1 537 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 PHTF1Q9UMS5 762 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 RPL26L1Q9UNX3 145 aaKnown RBP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 APOBEC2Q9Y235 224 aaKnown RBP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
CPNE1-209ENST00000415920 V9GYY5 206 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-209ENST00000415920 IGSF10Q6WRI0 2623 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 A0A0J9YYE9 177 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 LOC285095A0A1B0GVY8 99 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 NPIPB15A6NHN6 443 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-209ENST00000415920 A8MX80 341 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 SLC7A4O43246 635 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 SUN1O94901 812 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 CER1O95813 267 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 TRBC1P01850 177 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 ZNF883P0CG24 379 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 CYP2A6P11509 494 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-209ENST00000415920 ITIH2P19823 946 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 MMP12P39900 470 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 GRIA1P42261 906 aa13.63□□□□□ -0.23
CPNE1-209ENST00000415920 MAGEA6P43360 314 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms