RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 C14orf28Q4W4Y0 310 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 TMCO4Q5TGY1 634 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 Q6ZVL8 140 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 RAB11FIP2Q7L804 512 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 SPRED1Q7Z699 444 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 LZTR1Q8N653 840 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 Q8N9G6 341 aaPredicted RBP12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 SPC24Q8NBT2 197 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 PATE1Q8WXA2 126 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 TRIM11Q96F44 468 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 DTD2Q96FN9 168 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 SCRN2Q96FV2 425 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 CCDC42Q96M95 316 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 GFM1Q96RP9 751 aaKnown RBP12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 MCCC1Q96RQ3 725 aaPredicted RBP12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 SEMA6CQ9H3T2 930 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 ZWILCHQ9H900 591 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 MRPL47Q9HD33 250 aaKnown RBP12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 SPTLC3Q9NUV7 552 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 DONSONQ9NYP3 566 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 ACSL6Q9UKU0 697 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 PCDHGA7Q9Y5G6 932 aa12.43□□□□□ -0.42
NCKIPSD-203ENST00000415281 SSU72P8A0A1W2PR75 194 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 PRSS38A1L453 326 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 PRLP01236 227 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 PNLIPP16233 465 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 DESP17661 470 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 AK4P27144 223 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 VIPR1P32241 457 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 MLLT3P42568 568 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 ZNF135P52742 658 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 INHBCP55103 352 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 MAZP56270 477 aaKnown RBP12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 RHDQ02161 417 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 PTSQ03393 145 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 NR1D2Q14995 579 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 C16orf72Q14CZ0 275 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 ACOX1Q15067 660 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 ASTE1Q2TB18 679 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 BOLA3Q53S33 107 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 ZNF438Q7Z4V0 828 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 TAF8Q7Z7C8 310 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 CCNJLQ8IV13 435 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 FBXO39Q8N4B4 442 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 ARL14Q8N4G2 192 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 NIPA2Q8N8Q9 360 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 EXD3Q8N9H8 876 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 LRRN4Q8WUT4 740 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 HSPH1Q92598 858 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 SCARF2Q96GP6 870 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 WDR24Q96S15 920 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 AGAP2Q99490 1192 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 PACSIN1Q9BY11 444 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 EPB41L5Q9HCM4 733 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 LRIT1Q9P2V4 623 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 DOLKQ9UPQ8 538 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 SCINQ9Y6U3 715 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 SDK2Q58EX2 2172 aa12.42□□□□□ -0.42
NCKIPSD-203ENST00000415281 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 EIF4E1BA6NMX2 242 aaKnown RBP12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 C9orf172C9J069 976 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 H3BRJ5 948 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 AGRPO00253 132 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 CACNB4O00305 520 aaPredicted RBP12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 PPM1DO15297 605 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 SOCS5O75159 536 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 PGLSO95336 258 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 EML2O95834 649 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 CYP1A2P05177 515 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 MYCLP1P12525 358 aaPredicted RBP12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 CCNB1P14635 433 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 CTPS1P17812 591 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 RENBPP51606 427 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 UCNP55089 124 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 OR1D5P58170 312 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 SLC10A2Q12908 348 aaPredicted RBP12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 CFAP58Q5T655 872 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 BROXQ5VW32 411 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 HEATR4Q86WZ0 1026 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 DTX1Q86Y01 620 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 NAGSQ8N159 534 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 OR6C4Q8NGE1 309 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 ARRDC2Q8TBH0 407 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 TEKT4Q8WW24 435 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 SCG3Q8WXD2 468 aaKnown RBP12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 MAML1Q92585 1016 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 PMEPA1Q969W9 287 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 NUS1Q96E22 293 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 NUP85Q9BW27 656 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 ABCG8Q9H221 673 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 FOXJ2Q9P0K8 574 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 CNOT6Q9ULM6 557 aaKnown RBP12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 PHTF1Q9UMS5 762 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 SUFUQ9UMX1 484 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 SLC17A4Q9Y2C5 497 aa12.41□□□□□ -0.42
NCKIPSD-203ENST00000415281 AHCTF1Q8WYP5 2266 aa12.4□□□□□ -0.42
NCKIPSD-203ENST00000415281 B4DGG1 531 aa12.4□□□□□ -0.42
NCKIPSD-203ENST00000415281 NUDT21O43809 227 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms