RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 TYSND1Q2T9J0 566 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 RBM20Q5T481 1227 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 UGT3A1Q6NUS8 523 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 AAGABQ6PD74 315 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 CCDC149Q6ZUS6 474 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 DNAJB7Q7Z6W7 309 aaPredicted RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 ULK2Q8IYT8 1036 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 STK40Q8N2I9 435 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 NKAPQ8N5F7 415 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 RHEBL1Q8TAI7 183 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 MRPS31Q92665 395 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 ZNF689Q96CS4 500 aaPredicted RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 TMA16Q96EY4 203 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 CDKN2AIPNLQ96HQ2 116 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 DNAJC1Q96KC8 554 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 GCNAQ96QF7 691 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 TRIB3Q96RU7 358 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 NDNQ99608 321 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 TFB2MQ9H5Q4 396 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 TAS2R13Q9NYV9 303 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 GTSE1Q9NYZ3 720 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 PRPF19Q9UMS4 504 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 PLA2G4CQ9UP65 541 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 L3MBTL1Q9Y468 752 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 A0A0D9SEW6 157 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 SYCE1LA8MT33 242 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 STX7O15400 261 aaKnown RBP13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 DCXO43602 365 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 TBL1XO60907 577 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 VPS26AO75436 327 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 BAIAP3O94812 1187 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 FGF19O95750 216 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 IRF1P10914 325 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 CR2P20023 1033 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 VHLP40337 213 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 SUOXP51687 545 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 STC1P52823 247 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 DLG1Q12959 904 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 CYLC2Q14093 348 aaPredicted RBP13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 GALNT3Q14435 633 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 KPNB1Q14974 876 aaKnown RBP13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 CYTH1Q15438 398 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 CMPK2Q5EBM0 449 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 C1orf146Q5VVC0 180 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 NXNQ6DKJ4 435 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 MAVSQ7Z434 540 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 RNF135Q8IUD6 432 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 MFSD6LQ8IWD5 586 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 GJD3Q8N144 294 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 CARNMT1Q8N4J0 409 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 STAG3L4Q8TBR4 150 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 ACTRT2Q8TDY3 377 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 L3HYPDHQ96EM0 354 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 AARSD1Q9BTE6 412 aaKnown RBP13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 C2orf49Q9BVC5 232 aaPredicted RBP13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 TDRD1Q9BXT4 1180 aaKnown RBP13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 VCX3BQ9H321 246 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 STX18Q9P2W9 335 aaKnown RBP13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 RAI2Q9Y5P3 530 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 INSL5Q9Y5Q6 135 aa13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
SSR4P1-201ENST00000415143 EPOPA6NHQ4 379 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 A8MT66 165 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 E9PBE3 544 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 MUSKO15146 869 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 GRID2O43424 1007 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 CCNT2O60583 730 aaKnown RBP13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 TSPAN3O60637 253 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 KLHL41O60662 606 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 ENTPD5O75356 428 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 GPC4O75487 556 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 SRP72O76094 671 aaKnown RBP13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 RHOBTB1O94844 696 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 C1RP00736 705 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 KLKB1P03952 638 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 GNAZP19086 355 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 HDCP19113 662 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 ARRB2P32121 409 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 ARSDP51689 593 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 ZNF140P52738 457 aaPredicted RBP13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 EPHB1P54762 984 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 ACTR3P61158 418 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 RHOAP61586 193 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 CUL3Q13618 768 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 LSM12Q3MHD2 195 aaKnown RBP13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 KHDC1Q4VXA5 237 aaKnown RBP13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 MPP7Q5T2T1 576 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 EFL1Q7Z2Z2 1120 aaKnown RBP13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 DCAF4L2Q8NA75 395 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 LPCAT1Q8NF37 534 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 TET1Q8NFU7 2136 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 ACDQ96AP0 544 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 PRICKLE1Q96MT3 831 aaPredicted RBP13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 OLFM1Q99784 485 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 VN1R3Q9BXE9 311 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 EFCAB1Q9HAE3 211 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 BATF3Q9NR55 127 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
SSR4P1-201ENST00000415143 ZDHHC2Q9UIJ5 367 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms