RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 NXF3Q9H4D5 531 aaKnown RBP4.69□□□□□ -1.66
PTPRK-209ENST00000415046 PDZD7Q9H5P4 517 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 PARVGQ9HBI0 331 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 C1orf112Q9NSG2 853 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 PANK4Q9NVE7 773 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 PRMT7Q9NVM4 692 aaPredicted RBP4.69□□□□□ -1.66
PTPRK-209ENST00000415046 GOLGA6AQ9NYA3 693 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 KCND2Q9NZV8 630 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 LARSQ9P2J5 1176 aaKnown RBP4.69□□□□□ -1.66
PTPRK-209ENST00000415046 DKK4Q9UBT3 224 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 NKX1-2Q9UD57 310 aaPredicted RBP4.69□□□□□ -1.66
PTPRK-209ENST00000415046 ODF2LQ9ULJ1 636 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 GDAQ9Y2T3 454 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 HES2Q9Y543 173 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 PCDHB2Q9Y5E7 798 aa4.69□□□□□ -1.66
PTPRK-209ENST00000415046 GREB1Q4ZG55 1949 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 DOCK8Q8NF50 2099 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 IGKV2D-30A0A075B6S6 120 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 LINC01553A4QN01 128 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 EPOPA6NHQ4 379 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 CD8B2A6NJW9 211 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 ACKR2O00590 384 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 HNRNPDLO14979 420 aaKnown RBP4.68□□□□□ -1.66
PTPRK-209ENST00000415046 GCNT3O95395 438 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 GAP43P17677 238 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 ADRA1DP25100 572 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 AXLP30530 894 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 HOXA11P31270 313 aaPredicted RBP4.68□□□□□ -1.66
PTPRK-209ENST00000415046 PBX3P40426 434 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 LIG4P49917 911 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 ZNF131P52739 623 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 YPEL5P62699 121 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 GPC5P78333 572 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 HSF1Q00613 529 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 RNASELQ05823 741 aaKnown RBP4.68□□□□□ -1.66
PTPRK-209ENST00000415046 POU5F1BQ06416 359 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 COASYQ13057 564 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 CUL4BQ13620 913 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 GFOD2Q3B7J2 385 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 MIDNQ504T8 468 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 C3orf38Q5JPI3 329 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 ATF7IP2Q5U623 682 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 NXNQ6DKJ4 435 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
PTPRK-209ENST00000415046 SLC27A1Q6PCB7 646 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 CCDC65Q8IXS2 484 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 THNSL1Q8IYQ7 743 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 ARFGAP1Q8N6T3 406 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 TMEM161BQ8NDZ6 487 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 CNNM3Q8NE01 707 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 PPM1EQ8WY54 764 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 ADPGKQ9BRR6 497 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 TCHPQ9BT92 498 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 TRMOQ9BU70 441 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 FGFBP2Q9BYJ0 223 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 TRIM9Q9C026 710 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 CDT1Q9H211 546 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 TNMDQ9H2S6 317 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 FZD8Q9H461 694 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 CUEDC2Q9H467 287 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 MRPL44Q9H9J2 332 aaKnown RBP4.68□□□□□ -1.66
PTPRK-209ENST00000415046 MAGEF1Q9HAY2 307 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 POT1Q9NUX5 634 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 EXOC1Q9NV70 894 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 TMEM161AQ9NX61 479 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 STEAP1Q9UHE8 339 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 VPS51Q9UID3 782 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 MID2Q9UJV3 735 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 FZD4Q9ULV1 537 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 KIF26AQ9ULI4 1882 aaPredicted RBP4.68□□□□□ -1.66
PTPRK-209ENST00000415046 PRUNE2Q8WUY3 3088 aa4.68□□□□□ -1.66
PTPRK-209ENST00000415046 DENND4AQ7Z401 1863 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 A0A0U1RQF3 1178 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 A0A1B0GUA9 196 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 ARL5CA6NH57 179 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 A6NNZ2 444 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 ANKRD63C9JTQ0 380 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 H0YCG3 227 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 RAB27BO00194 218 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 KINO60870 393 aaKnown RBP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 ZC3H11AO75152 810 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 PSG1P11464 419 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 TACR3P29371 465 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 CA8P35219 290 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 MLH1P40692 756 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 THBS3P49746 956 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 CASP5P51878 434 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 TXNL4AP83876 142 aaKnown RBP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 FMO1Q01740 532 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 PNOCQ13519 176 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 HLTFQ14527 1009 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 CLCA4Q14CN2 919 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 BRD3Q15059 726 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 DCAF4L1Q3SXM0 396 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 EPC2Q52LR7 807 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 GLRA4Q5JXX5 417 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 KRBA2Q6ZNG9 492 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 NELFCDQ8IXH7 590 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 YAF2Q8IY57 180 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 HACE1Q8IYU2 909 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms