RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 RUNDC3AQ59EK9 446 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 TEX35Q5T0J7 233 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 Q6ZSV7 163 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 ENOSF1Q7L5Y1 443 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 SERPINA11Q86U17 422 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 WDR5BQ86VZ2 330 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 PLA2G4DQ86XP0 818 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 ERC1Q8IUD2 1116 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 IQCF2Q8IXL9 164 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 TEX11Q8IYF3 940 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 MYCT1Q8N699 235 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 SCAIQ8N9R8 606 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 TDRD7Q8NHU6 1098 aaKnown RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 KIF18AQ8NI77 898 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 CEP76Q8TAP6 659 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 RUFY2Q8WXA3 655 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 JAKMIP2Q96AA8 810 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 MED30Q96HR3 178 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 FAM84BQ96KN1 310 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 UBXN10Q96LJ8 280 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 CHCHD6Q9BRQ6 235 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRIM6Q9C030 488 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 LRRCC1Q9C099 1032 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 LMAN2LQ9H0V9 348 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 YY1AP1Q9H869 796 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 CHODLQ9H9P2 273 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRMT1Q9NXH9 659 aaKnown RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 GRHL1Q9NZI5 618 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 EPS15L1Q9UBC2 864 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 PLEKHB1Q9UF11 243 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 SUN2Q9UH99 717 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 GTF3C4Q9UKN8 822 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 BLOC1S6Q9UL45 172 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 DHDHQ9UQ10 334 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 NPHP3Q7Z494 1330 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 USP42Q9H9J4 1324 aaKnown RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 NPATQ14207 1427 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 EDC4Q6P2E9 1401 aaKnown RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 RIMS2Q9UQ26 1411 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 PXDNLA1KZ92 1463 aa3.84□□□□□ -1.8
HMGB3P23-201ENST00000414981 CD163L1Q9NR16 1453 aa3.84□□□□□ -1.8
HMGB3P23-201ENST00000414981 MROH2AA6NES4 1674 aa3.84□□□□□ -1.8
HMGB3P23-201ENST00000414981 OR6C68A6NDL8 312 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 RRN3P2A6NIE6 340 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 B9A039 149 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PRSS44E7EML9 344 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PRR23D1E9PI22 279 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 HIP1O00291 1037 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 ASAP2O43150 1006 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 LIASO43766 372 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 BBOX1O75936 387 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 SOX30O94993 753 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 SLC4A1P02730 911 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 DNTTP04053 509 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 MMP3P08254 477 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PRR23D2P0DMB1 279 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 FGF3P11487 239 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PRKAR2BP31323 418 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 DPP6P42658 865 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PPP3CCP48454 512 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PCYT1AP49585 367 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PMS2P54278 862 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PRKAA2P54646 552 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 CDH12P55289 794 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 DSCR9P59020 149 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 TPM4P67936 248 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PPFIA1Q13136 1202 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 SHROOM1Q2M3G4 852 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 CBWD5Q5RIA9 395 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 HECTD3Q5T447 861 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZNF324BQ6AW86 544 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 ITPRIPL1Q6GPH6 555 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 TATDN1Q6P1N9 297 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 SYNE3Q6ZMZ3 975 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 FAM83HQ6ZRV2 1179 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZNF771Q7L3S4 317 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 OTUD6AQ7L8S5 288 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 RBM23Q86U06 439 aaKnown RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 TRIM74Q86UV6 250 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 TRIM73Q86UV7 250 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 RBFAQ8N0V3 343 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 AFAP1Q8N556 730 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 SPPL3Q8TCT6 385 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 MGARPQ8TDB4 240 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 HDAC2Q92769 488 aaKnown RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 KIF1BPQ96EK5 621 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 TSGA13Q96PP4 275 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 GFM1Q96RP9 751 aaKnown RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 NUDT16L1Q9BRJ7 211 aaKnown RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 HERC2P3Q9BVR0 1158 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 SLC26A6Q9BXS9 759 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 CDT1Q9H211 546 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 ACAD9Q9H845 621 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 TTC12Q9H892 705 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 RMI1Q9H9A7 625 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 ARGLU1Q9NWB6 273 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PSD3Q9NYI0 1048 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 GGA3Q9NZ52 723 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 IFT80Q9P2H3 777 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 UPB1Q9UBR1 384 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms