RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 BMP10O95393 424 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 NSA2O95478 260 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 AK1P00568 194 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SLPIP03973 132 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KRT6BP04259 564 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 MPOP05164 745 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TUBBP07437 444 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ITGA5P08648 1049 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 GSTA2P09210 222 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CNPP09543 421 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 GSTT2P0CG29 244 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 GSTT2BP0CG30 244 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 HSMCR30P0CW71 290 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 THRBP10828 461 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CHRNB1P11230 501 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ETS1P14921 441 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CPA1P15085 419 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 GNSP15586 552 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TCN1P20061 433 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CYP3A5P20815 502 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CYP2A7P20853 494 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 C5AR1P21730 350 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CCNE1P24864 410 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TACR1P25103 407 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 YWHAQP27348 245 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 PSMA5P28066 241 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CD1BP29016 333 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 PTPN6P29350 595 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CCND2P30279 289 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CHRNA3P32297 505 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 MCM7P33993 719 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 IL12RB1P42701 662 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ALDH3B1P43353 468 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CAPZA2P47755 286 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 LEPRP48357 1165 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KRT6CP48668 564 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 HARS2P49590 506 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 HSD17B4P51659 736 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ARSEP51690 589 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF143P52747 638 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 AIF1P55008 147 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 PRMT2P55345 433 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ACTR3P61158 418 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 HNRNPKP61978 463 aaKnown RBP eCLIP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TUBB4BP68371 445 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ST5P78524 1137 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ALDH6A1Q02252 535 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CEBPZQ03701 1054 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF33BQ06732 778 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SPIRE1Q08AE8 756 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TEFQ10587 303 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ABRQ12979 859 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 PMS2P3Q13401 168 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TUBB2AQ13885 445 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CAPRIN1Q14444 709 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 RRP1BQ14684 758 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 NR1D2Q14995 579 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KARSQ15046 597 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 RPS6KA1Q15418 735 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TBCCQ15814 346 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SKIDA1Q1XH10 827 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KLHL40Q2TBA0 621 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KLHL26Q53HC5 615 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 NOL9Q5SY16 702 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 FAM69AQ5T7M9 428 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 C6orf163Q5TEZ5 329 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF425Q6IV72 752 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KIAA1211LQ6NV74 962 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SCYL2Q6P3W7 929 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 FAM111BQ6SJ93 734 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TMEM270Q6UE05 265 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KCNT2Q6UVM3 1135 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 COLCA1Q6ZS62 124 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TOM1L2Q6ZVM7 507 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 H1FNTQ75WM6 255 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KANSL1Q7Z3B3 1105 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 EXOC3L1Q86VI1 746 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ZC3H18Q86VM9 953 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CCDC25Q86WR0 208 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 FAM131BQ86XD5 332 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 COL23A1Q86Y22 540 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 RASAL3Q86YV0 1011 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CLVS1Q8IUQ0 354 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TBC1D10CQ8IV04 446 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CMIPQ8IY22 773 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SRRM1Q8IYB3 904 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ELMOD2Q8IZ81 293 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 IQCKQ8N0W5 287 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TBC1D19Q8N5T2 526 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TTC9BQ8N6N2 239 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SRFBP1Q8NEF9 429 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 GPR156Q8NFN8 814 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 OR8J2Q8NGG1 315 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 OR52J3Q8NH60 311 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 LKAAEAR1Q8TD35 194 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ACTRT2Q8TDY3 377 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 AFG1LQ8WV93 481 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 KCNE4Q8WWG9 221 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CORO2AQ92828 525 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms