RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 TMEM159Q96B96 161 aa16.77■□□□□ 0.28
SF1-207ENST00000413951 TMEM74Q96NL1 305 aa16.77■□□□□ 0.28
SF1-207ENST00000413951 RNF157Q96PX1 679 aa16.77■□□□□ 0.28
SF1-207ENST00000413951 GFM1Q96RP9 751 aaKnown RBP16.77■□□□□ 0.28
SF1-207ENST00000413951 CLPBQ9H078 707 aa16.77■□□□□ 0.28
SF1-207ENST00000413951 SYNDIG1Q9H7V2 258 aa16.77■□□□□ 0.28
SF1-207ENST00000413951 GPR34Q9UPC5 381 aa16.77■□□□□ 0.28
SF1-207ENST00000413951 CDRT15L2A8MXV6 281 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 NTN3O00634 580 aaPredicted RBP16.76■□□□□ 0.27
SF1-207ENST00000413951 TNFRSF10CO14798 259 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 TNFSF15O95150 251 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 ZRANB2O95218 330 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■■■□□ 14.8
SF1-207ENST00000413951 HOXC4P09017 264 aaPredicted RBP16.76■□□□□ 0.27
SF1-207ENST00000413951 TNNT1P13805 278 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 PNLIPP16233 465 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 ITIH2P19823 946 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 PTPN7P35236 360 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 PAPOLAP51003 745 aaKnown RBP16.76■□□□□ 0.27
SF1-207ENST00000413951 RWDD2BP57060 319 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 COPS2P61201 443 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 AP1S1P61966 158 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 IL10RBQ08334 325 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 PPP2R5EQ16537 467 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 ARHGAP40Q5TG30 622 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 MEI1Q5TIA1 1274 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 NCBP2-AS2Q69YL0 99 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 CRTC1Q6UUV9 634 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 TMCO3Q6UWJ1 677 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 MFSD7Q6UXD7 560 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 SPOCD1Q6ZMY3 1216 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 RD3Q7Z3Z2 195 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 CLEC14AQ86T13 490 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 BBS5Q8N3I7 341 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 TSACCQ96A04 125 aaPredicted RBP16.76■□□□□ 0.27
SF1-207ENST00000413951 RBM41Q96IZ5 413 aaKnown RBP16.76■□□□□ 0.27
SF1-207ENST00000413951 CAAP1Q9H8G2 361 aa16.76■□□□□ 0.27
SF1-207ENST00000413951 SMG1Q96Q15 3661 aaKnown RBP16.76■□□□□ 0.27
SF1-207ENST00000413951 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.75■□□□□ 0.27
SF1-207ENST00000413951 J3KR12 359 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 PCCBP05166 539 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 ELFN1P0C7U0 828 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 SERPINB6P35237 376 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 HSPA9P38646 679 aaKnown RBP16.75■□□□□ 0.27
SF1-207ENST00000413951 KIAA1024LP59773 190 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 SKOR1P84550 965 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 PEX6Q13608 980 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 ZFYVE27Q5T4F4 411 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 FOXR1Q6PIV2 292 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 CAMK1DQ8IU85 385 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 UBL4BQ8N7F7 174 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 PLD5Q8N7P1 536 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 OR56A4Q8NGH8 313 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 RNF25Q96BH1 459 aaPredicted RBP16.75■□□□□ 0.27
SF1-207ENST00000413951 CELF6Q96J87 481 aaKnown RBP16.75■□□□□ 0.27
SF1-207ENST00000413951 ZNF599Q96NL3 588 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 RBM15Q96T37 977 aaKnown RBP eCLIP16.75■□□□□ 0.274e-9■■□□□ 11.9
SF1-207ENST00000413951 SLC39A8Q9C0K1 460 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 TRMT1Q9NXH9 659 aaKnown RBP16.75■□□□□ 0.27
SF1-207ENST00000413951 SEPT3Q9UH03 358 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 PACSIN2Q9UNF0 486 aaPredicted RBP16.75■□□□□ 0.27
SF1-207ENST00000413951 EFR3BQ9Y2G0 817 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 COQ6Q9Y2Z9 468 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 PCDHGA7Q9Y5G6 932 aa16.75■□□□□ 0.27
SF1-207ENST00000413951 PTPRQQ9UMZ3 2332 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 hCG_1818297A0A087WSY0 165 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 PLD2O14939 933 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 PRB1P04280 392 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 GLB1P16278 677 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 INHBCP55103 352 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 TFDP3Q5H9I0 405 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 CCDC81Q6ZN84 652 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 FBXO39Q8N4B4 442 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 TSEN2Q8NCE0 465 aaKnown RBP16.74■□□□□ 0.27
SF1-207ENST00000413951 CCDC74AQ96AQ1 378 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 ECHDC3Q96DC8 303 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 PRR11Q96HE9 360 aaPredicted RBP16.74■□□□□ 0.27
SF1-207ENST00000413951 TLR10Q9BXR5 811 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 CPNE5Q9HCH3 593 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 SIRPGQ9P1W8 387 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 APPL1Q9UKG1 709 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 PNMA8BQ9ULN7 279 aaPredicted RBP16.74■□□□□ 0.27
SF1-207ENST00000413951 OR1A2Q9Y585 309 aa16.74■□□□□ 0.27
SF1-207ENST00000413951 SHROOM3Q8TF72 1996 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 D6RAR5 112 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 DFFAO00273 331 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 MFSD11O43934 449 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 C1QL1O75973 258 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 RECQL5O94762 991 aaPredicted RBP16.73■□□□□ 0.27
SF1-207ENST00000413951 RPLP0P05388 317 aaKnown RBP16.73■□□□□ 0.27
SF1-207ENST00000413951 PYGMP11217 842 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 CCKBRP32239 447 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 ADCY2Q08462 1091 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 GALNT2Q10471 571 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 BBS12Q6ZW61 710 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 DPPA4Q7L190 304 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 RAB11FIP2Q7L804 512 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 TAF8Q7Z7C8 310 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 LRRC49Q8IUZ0 686 aa16.73■□□□□ 0.27
SF1-207ENST00000413951 TP53INP2Q8IXH6 220 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms