RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 WASF1Q92558 559 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 ARHGEF26Q96DR7 871 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 ITPAQ9BY32 194 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 PDZD7Q9H5P4 517 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 PPP1R3EQ9H7J1 279 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 POLR1BQ9H9Y6 1135 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 GPR108Q9NPR9 543 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 CNGB3Q9NQW8 809 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 KRT84Q9NSB2 600 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 SLC9A2Q9UBY0 812 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 RCOR1Q9UKL0 485 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 IGKV2D-30A0A075B6S6 120 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 SRRM3A6NNA2 597 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 NKX2-2O95096 273 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 MLYCDO95822 493 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 SRCP12931 536 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 TNFRSF8P28908 595 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 TM4SF1P30408 202 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 HOXC9P31274 260 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 EIF2S3P41091 472 aaKnown RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 FASLGP48023 281 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 F2RL1P55085 397 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 TUBA1BP68363 451 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 DHX34Q14147 1143 aaKnown RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 MED22Q15528 200 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 ADIPOQQ15848 244 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 EIF2S3LQ2VIR3 472 aaKnown RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 CDONQ4KMG0 1287 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 ATP13A5Q4VNC0 1218 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 XKR9Q5GH70 373 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 GPATCH4Q5T3I0 446 aaKnown RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 FAM122CQ6P4D5 195 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 C4orf50Q6ZRC1 276 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 DPPA4Q7L190 304 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 TAOK1Q7L7X3 1001 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 CACNA2D4Q7Z3S7 1137 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 ADHFE1Q8IWW8 467 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 CHERPQ8IWX8 916 aaKnown RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 RNF168Q8IYW5 571 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 DSELQ8IZU8 1212 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 PGBD5Q8N414 524 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 TMED6Q8WW62 240 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 USP6NLQ92738 828 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 IGSF8Q969P0 613 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 MED30Q96HR3 178 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 HARBI1Q96MB7 349 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 WDFY2Q96P53 400 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 FIZ1Q96SL8 496 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 ACOX2Q99424 681 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 TM6SF1Q9BZW5 370 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 NDST4Q9H3R1 872 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 PCDH9Q9HC56 1237 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 RANGRFQ9HD47 186 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 HCFC1R1Q9NWW0 138 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 CNOT8Q9UFF9 292 aaKnown RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 TINAGQ9UJW2 476 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 LYVE1Q9Y5Y7 322 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 NFS1Q9Y697 457 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 BAZ1BQ9UIG0 1483 aaKnown RBP3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 CC2D2AQ9P2K1 1620 aa3.83□□□□□ -1.8
HMGB1P11-201ENST00000413899 hDV102S1A0JD36 115 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 A8MZ25 164 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 AKR1B15C9JRZ8 316 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 PTP4A3O75365 173 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 DAB1O75553 588 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 RFPL2O75678 378 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 SLC25A12O75746 678 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 PPP1R3DO95685 299 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 G6PDP11413 515 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 PLA2G2AP14555 144 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 RRM1P23921 792 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 NFKBIAP25963 317 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 SSTR2P30874 369 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 PEX5P50542 639 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 HNRNPH2P55795 449 aaKnown RBP3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 CALCRLQ16602 461 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 SIGIRRQ6IA17 410 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 KCTD18Q6PI47 426 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 SEPT14Q6ZU15 432 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 CREB3L2Q70SY1 520 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 MEPCEQ7L2J0 689 aaKnown RBP3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 NUDCD2Q8WVJ2 157 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 POMGNT1Q8WZA1 660 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 RTP4Q96DX8 246 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 RRNAD1Q96FB5 475 aaKnown RBP3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 SCMH1Q96GD3 660 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 SEPT5Q99719 369 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 CHCHD6Q9BRQ6 235 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 GAREM1Q9H706 876 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 NOX4Q9NPH5 578 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 TBC1D22BQ9NU19 505 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 BLOC1S4Q9NUP1 217 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 MCM9Q9NXL9 1143 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 C1RLQ9NZP8 487 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 TTC7AQ9ULT0 858 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 MAU2Q9Y6X3 613 aa3.82□□□□□ -1.8
HMGB1P11-201ENST00000413899 WDR97A6NE52 1622 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 NCAPD3P42695 1498 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 C4orf47A7E2U8 309 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms