RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ATP9BO43861 1147 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 SH3BP5O60239 455 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ACSL4O60488 711 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 TGDSO95455 350 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ALDOAP04075 364 aaKnown RBP17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ERVK-10P10266 1014 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 HMGA1P17096 107 aaKnown RBP17.19■□□□□ 0.34
PTPRC-206ENST00000413409 HADHAP40939 763 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 SCTRP47872 440 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 PPP3CCP48454 512 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 LIG3P49916 1009 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 C2orf27AQ580R0 203 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 HECTD3Q5T447 861 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 TEDDM1Q5T9Z0 273 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ITIH5Q86UX2 942 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 KCNMB4Q86W47 210 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 CNTN4Q8IWV2 1026 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 MINDY1Q8N5J2 469 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 CCDC63Q8NA47 563 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 C10orf82Q8WW14 230 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ATP2A3Q93084 1043 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ZNF599Q96NL3 588 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 APOL2Q9BQE5 337 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 MCMBPQ9BTE3 642 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 TSSK1BQ9BXA7 367 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ARNT2Q9HBZ2 717 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 CAPN10Q9HC96 672 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ATP13A1Q9HD20 1204 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 TDP1Q9NUW8 608 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 SIRPGQ9P1W8 387 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 SLC17A6Q9P2U8 582 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 SLC6A14Q9UN76 642 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 TCAF1Q9Y4C2 921 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 PSAT1Q9Y617 370 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 TPP1O14773 563 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 MAP3K13O43283 966 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 DNAJC8O75937 253 aaPredicted RBP17.18■□□□□ 0.34
PTPRC-206ENST00000413409 MT-CYBP00156 380 aaPredicted RBP17.18■□□□□ 0.34
PTPRC-206ENST00000413409 HMBSP08397 361 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 CDC25CP30307 473 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 SLC11A2P49281 568 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 SEC13P55735 322 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 SERINC3Q13530 473 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 VEPH1Q14D04 833 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 PDGFRLQ15198 375 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 CRY1Q16526 586 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 GALNTL6Q49A17 601 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 SPDYAQ5MJ70 313 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 MARC1Q5VT66 337 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 ATG16L1Q676U5 607 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 CES3Q6UWW8 571 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 RANBP10Q6VN20 620 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 SLCO6A1Q86UG4 719 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 SLC39A7Q92504 469 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 TADA1Q96BN2 335 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 MRGPRX2Q96LB1 330 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 RANBP9Q96S59 729 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 FSD1LQ9BXM9 530 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 C12orf65Q9H3J6 166 aaKnown RBP17.18■□□□□ 0.34
PTPRC-206ENST00000413409 UBP1Q9NZI7 540 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 TRPM5Q9NZQ8 1165 aa17.18■□□□□ 0.34
PTPRC-206ENST00000413409 MAGED2Q9UNF1 606 aaPredicted RBP17.18■□□□□ 0.34
PTPRC-206ENST00000413409 CHD5Q8TDI0 1954 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 WDR91A4D1P6 747 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 PRAMEF11O60813 436 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 SIN3BO75182 1162 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 DCTN3O75935 186 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 BPGMP07738 259 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 BGNP21810 368 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 ALDH3A1P30838 453 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 HARS2P49590 506 aaKnown RBP17.17■□□□□ 0.34
PTPRC-206ENST00000413409 ATXN3P54252 364 aaPredicted RBP17.17■□□□□ 0.34
PTPRC-206ENST00000413409 WNT3AP56704 352 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 POLD3Q15054 466 aaPredicted RBP17.17■□□□□ 0.34
PTPRC-206ENST00000413409 SLC14A2Q15849 920 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 UGP2Q16851 508 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 SPRED3Q2MJR0 410 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 MAP7D1Q3KQU3 841 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 TMCO4Q5TGY1 634 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 LYSMD4Q5XG99 296 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 TXNDC8Q6A555 127 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 KIAA0930Q6ICG6 404 aaPredicted RBP17.17■□□□□ 0.34
PTPRC-206ENST00000413409 STRA8Q7Z7C7 330 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 MARCH9Q86YJ5 346 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 C10orf67Q8IYJ2 551 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 ARMC2Q8NEN0 867 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 PTPRN2Q92932 1015 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 MFSD3Q96ES6 412 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 RMDN2Q96LZ7 410 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 C7orf26Q96N11 449 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 UBL7Q96S82 380 aaPredicted RBP17.17■□□□□ 0.34
PTPRC-206ENST00000413409 RASSF4Q9H2L5 321 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 CHRAC1Q9NRG0 131 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 C20orf96Q9NUD7 363 aaPredicted RBP17.17■□□□□ 0.34
PTPRC-206ENST00000413409 DKK4Q9UBT3 224 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 DCDC2Q9UHG0 476 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 MMP17Q9ULZ9 603 aa17.17■□□□□ 0.34
PTPRC-206ENST00000413409 PTPRBP23467 1997 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms