RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 GDF3Q9NR23 364 aa7.71□□□□□ -1.18
CPSF4-202ENST00000412686 TM7SF3Q9NS93 570 aa7.71□□□□□ -1.18
CPSF4-202ENST00000412686 DNAAF2Q9NVR5 837 aaKnown RBP7.71□□□□□ -1.18
CPSF4-202ENST00000412686 PIH1D1Q9NWS0 290 aaKnown RBP7.71□□□□□ -1.18
CPSF4-202ENST00000412686 RPL26L1Q9UNX3 145 aaKnown RBP7.71□□□□□ -1.18
CPSF4-202ENST00000412686 BTBD3Q9Y2F9 522 aa7.71□□□□□ -1.18
CPSF4-202ENST00000412686 HS3ST3A1Q9Y663 406 aa7.71□□□□□ -1.18
CPSF4-202ENST00000412686 EP300Q09472 2414 aaPredicted RBP7.71□□□□□ -1.18
CPSF4-202ENST00000412686 TDRD6O60522 2096 aaKnown RBP7.71□□□□□ -1.18
CPSF4-202ENST00000412686 FADS2P1A8MWK0 482 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 PSMD11O00231 422 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 TM4SF5O14894 197 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 GIPC1O14908 333 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 GPR39O43194 453 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 SH3BP5O60239 455 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 FOXD2O60548 495 aaPredicted RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 GCATO75600 419 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 STK10O94804 968 aaKnown RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 ITGAVP06756 1048 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 CELA2BP08218 269 aaPredicted RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 ZNF30P17039 623 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 EPHA8P29322 1005 aaPredicted RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 RPL22P35268 128 aaKnown RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 ADRA1AP35348 466 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 RABIFP47224 123 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 SPINT3P49223 89 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 CCT8P50990 548 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 TERF1P54274 439 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 MTM1Q13496 603 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 AGERQ15109 404 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 TRIP13Q15645 432 aaPredicted RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 PARP6Q2NL67 630 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 P3H1Q32P28 736 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 KCTD11Q693B1 232 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 RAET1GQ6H3X3 334 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 ESRP1Q6NXG1 681 aaKnown RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 PNCKQ6P2M8 343 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 IL27RAQ6UWB1 636 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 TMC3Q7Z5M5 1100 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 TRIM74Q86UV6 250 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 IQCHQ86VS3 1027 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 ZSCAN30Q86W11 494 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 HEATR4Q86WZ0 1026 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 KLHDC8BQ8IXV7 354 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 DEFB124Q8NES8 71 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 BLOC1S5Q8TDH9 187 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 SKA1Q96BD8 255 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 AP2M1Q96CW1 435 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 RTP4Q96DX8 246 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 APOOQ9BUR5 198 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 RIOK2Q9BVS4 552 aaKnown RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 C1QTNF7Q9BXJ2 289 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 FSD1LQ9BXM9 530 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 FRMD8P1Q9BZ68 369 aaPredicted RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 ZFYVE1Q9HBF4 777 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 ETNK1Q9HBU6 452 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 BPIFA1Q9NP55 256 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 MRPL40Q9NQ50 206 aaKnown RBP7.7□□□□□ -1.18
CPSF4-202ENST00000412686 UCKL1Q9NWZ5 548 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 DNAJC28Q9NX36 388 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 DLL3Q9NYJ7 618 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 CACNA1EQ15878 2313 aa7.7□□□□□ -1.18
CPSF4-202ENST00000412686 ZNF106Q9H2Y7 1883 aaKnown RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 ASCC3Q8N3C0 2202 aaKnown RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 SPTY2D1-AS1A0A0U1RR47 76 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 TMEM202A6NGA9 273 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 PGRMC1O00264 195 aaKnown RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 PDE2AO00408 941 aaPredicted RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 INPP4BO15327 924 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 MAGEC1O60732 1142 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 PIAS2O75928 621 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 ANXA9O76027 345 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 EPOP01588 193 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 FGF1P05230 155 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 BPIP17213 487 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 TPH1P17752 444 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 TCP1P17987 556 aaKnown RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 HLA-DPA1P20036 260 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 NFKBIAP25963 317 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 MSNP26038 577 aaKnown RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 STIP1P31948 543 aaKnown RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 CA5AP35218 305 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 GRIA1P42261 906 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 GPR1P46091 355 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 ID4P47928 161 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 POLD2P49005 469 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 VPS41P49754 854 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 THOP1P52888 689 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 CDK3Q00526 305 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 OVGP1Q12889 678 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 MSLNQ13421 630 aaPredicted RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 PRPSAP1Q14558 356 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 NFATC4Q14934 902 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 ALG11Q2TAA5 492 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 ZNF648Q5T619 568 aaPredicted RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 PAPD7Q5XG87 772 aaKnown RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 DENND5AQ6IQ26 1287 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 CCDC70Q6NSX1 233 aa7.69□□□□□ -1.18
CPSF4-202ENST00000412686 DRICH1Q6PGQ1 229 aaPredicted RBP7.69□□□□□ -1.18
CPSF4-202ENST00000412686 ENPP7Q6UWV6 458 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms