RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 CYTH1Q15438 398 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 TAF1AQ15573 450 aaPredicted RBP16.45■□□□□ 0.22
HCG18-233ENST00000412685 OR4D1Q15615 310 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 PPP1R3AQ16821 1122 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 CLEC6AQ6EIG7 209 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 ZNF461Q8TAF7 563 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 MYRFLQ96LU7 910 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 MRGBPQ9NV56 204 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 ADAMTS6Q9UKP5 1117 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 TBC1D30Q9Y2I9 924 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 UBA6A0AVT1 1052 aaPredicted RBP16.45■□□□□ 0.22
HCG18-233ENST00000412685 H3BMM5 538 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 UBDO15205 165 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 CXCL10P02778 98 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 RAG1P15918 1043 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 ZNF423Q2M1K9 1284 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 EML3Q32P44 896 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 RNF219Q5W0B1 726 aaPredicted RBP16.45■□□□□ 0.22
HCG18-233ENST00000412685 AFTPHQ6ULP2 937 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 C16orf59Q7L2K0 433 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 DEFB128Q7Z7B8 93 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 PTGR2Q8N8N7 351 aaPredicted RBP16.45■□□□□ 0.22
HCG18-233ENST00000412685 MDGA1Q8NFP4 955 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 WBP2Q969T9 261 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 SMIM14Q96QK8 99 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 NPAS2Q99743 824 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 HIPK3Q9H422 1215 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 C2orf78A6NCI8 922 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 H3BNX3 289 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 DPP6P42658 865 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 PKNOX1P55347 436 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 PLD1Q13393 1074 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 CEACAM7Q14002 265 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 SQLEQ14534 574 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.44■□□□□ 0.22
HCG18-233ENST00000412685 GK5Q6ZS86 529 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 LPCAT1Q8NF37 534 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 RHEBL1Q8TAI7 183 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 LPGAT1Q92604 370 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 MUC3BQ9H195 1237 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 PCDHGC4Q9Y5F7 938 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 RAI2Q9Y5P3 530 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 A6NHS1 94 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 C2orf81A6NN90 581 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 UBXN8O00124 270 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 ABLIM3O94929 683 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 XRCC1P18887 633 aaPredicted RBP16.44■□□□□ 0.22
HCG18-233ENST00000412685 CES1P23141 567 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 CDH13P55290 713 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 TAF12Q16514 161 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 FAM219BQ5XKK7 198 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 CXorf57Q6NSI4 855 aaKnown RBP16.44■□□□□ 0.22
HCG18-233ENST00000412685 CYHR1Q6ZMK1 362 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 HMGCLL1Q8TB92 370 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 USP13Q92995 863 aaPredicted RBP16.44■□□□□ 0.22
HCG18-233ENST00000412685 KLF16Q9BXK1 252 aaPredicted RBP16.44■□□□□ 0.22
HCG18-233ENST00000412685 PPP1R12CQ9BZL4 782 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 UNC93B1Q9H1C4 597 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 TFB2MQ9H5Q4 396 aaKnown RBP16.44■□□□□ 0.22
HCG18-233ENST00000412685 TRPC7Q9HCX4 862 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 MED16Q9Y2X0 877 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 YIPF1Q9Y548 306 aa16.44■□□□□ 0.22
HCG18-233ENST00000412685 RHOBTB1O94844 696 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 MYCP01106 439 aaPredicted RBP16.43■□□□□ 0.22
HCG18-233ENST00000412685 F11P03951 625 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 MTHFD2P13995 350 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 FMO4P31512 558 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 ALDH1A3P47895 512 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 LRRC36Q1X8D7 754 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 ATOH8Q96SQ7 321 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 TCF12Q99081 682 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 ZBED2Q9BTP6 218 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 MRPL1Q9BYD6 325 aaKnown RBP16.43■□□□□ 0.22
HCG18-233ENST00000412685 TAS2R13Q9NYV9 303 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 FAM50BQ9Y247 325 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 STX16-NPEPL1H3BU86 382 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 PSMD12O00232 456 aaPredicted RBP16.43■□□□□ 0.22
HCG18-233ENST00000412685 GPC4O75487 556 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 NDUFS3O75489 264 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 SRP72O76094 671 aaKnown RBP16.43■□□□□ 0.22
HCG18-233ENST00000412685 SIX3O95343 332 aaPredicted RBP16.43■□□□□ 0.22
HCG18-233ENST00000412685 C1RP00736 705 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 PSMA3P25788 255 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 ARF5P84085 180 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 FLOT2Q14254 428 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 FASTKQ14296 549 aaKnown RBP16.43■□□□□ 0.22
HCG18-233ENST00000412685 PFKFB4Q16877 469 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 TMEM154Q6P9G4 183 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 RAB44Q7Z6P3 723 aaPredicted RBP16.43■□□□□ 0.22
HCG18-233ENST00000412685 TMA16Q96EY4 203 aaKnown RBP16.43■□□□□ 0.22
HCG18-233ENST00000412685 CCDC68Q9H2F9 335 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 SYTL2Q9HCH5 934 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 SMPD4Q9NXE4 827 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 HSFX1Q9UBD0 423 aa16.43■□□□□ 0.22
HCG18-233ENST00000412685 LPOP22079 712 aaPredicted RBP16.42■□□□□ 0.22
HCG18-233ENST00000412685 SH3BP2P78314 561 aa16.42■□□□□ 0.22
HCG18-233ENST00000412685 MAPRE2Q15555 327 aa16.42■□□□□ 0.22
HCG18-233ENST00000412685 SETMARQ53H47 684 aaPredicted RBP16.42■□□□□ 0.22
HCG18-233ENST00000412685 LPCAT4Q643R3 524 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms