RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 NPLQ9BXD5 320 aaPredicted RBP1.35□□□□□ -2.19
RNU4-43P-201ENST00000410628 TTC12Q9H892 705 aaPredicted RBP1.35□□□□□ -2.19
RNU4-43P-201ENST00000410628 CHODLQ9H9P2 273 aa1.35□□□□□ -2.19
RNU4-43P-201ENST00000410628 PELI2Q9HAT8 420 aa1.35□□□□□ -2.19
RNU4-43P-201ENST00000410628 PCDH9Q9HC56 1237 aa1.35□□□□□ -2.19
RNU4-43P-201ENST00000410628 PRO0461Q9UI25 63 aa1.35□□□□□ -2.19
RNU4-43P-201ENST00000410628 DLGAP4Q9Y2H0 992 aa1.35□□□□□ -2.19
RNU4-43P-201ENST00000410628 COL5A2P05997 1499 aaPredicted RBP1.35□□□□□ -2.19
RNU4-43P-201ENST00000410628 CTAGE9A4FU28 777 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 AKR1B15C9JRZ8 316 aaPredicted RBP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 STX16-NPEPL1H3BU86 382 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 PSMD14O00487 310 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 STX16O14662 325 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 FFAR2O15552 330 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 MLYCDO95822 493 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 TPOP07202 933 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 CTAGE8P0CG41 777 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 CEACAM1P13688 526 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 ETFAP13804 333 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 SLC2A4P14672 509 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 ZNF8P17098 575 aaPredicted RBP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 BDKRB2P30411 391 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 HOXC8P31273 242 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 AMPHP49418 695 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 METAP2P50579 478 aaKnown RBP eCLIP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 NEK3P51956 506 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 HNRNPH2P55795 449 aaKnown RBP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 ITGA9Q13797 1035 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 TIGD6Q17RP2 521 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 ZC2HC1CQ53FD0 456 aaPredicted RBP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 TECRLQ5HYJ1 363 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 IL31Q6EBC2 164 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 ZNF280DQ6N043 979 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 ZNF343Q6P1L6 599 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 KSR2Q6VAB6 950 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 RSRC2Q7L4I2 434 aaKnown RBP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 SRLQ86TD4 932 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 KRTAP11-1Q8IUC1 163 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 CTAGE4Q8IX94 777 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 SLC35F3Q8IY50 421 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 LINC00612Q8N6U2 182 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 DDHD1Q8NEL9 900 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 AGBL3Q8NEM8 1001 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 ACVR1CQ8NER5 493 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 SLC38A5Q8WUX1 472 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 SNAPC3Q92966 411 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 TMEM41AQ96HV5 264 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 SGCZQ96LD1 299 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 RBM4BQ9BQ04 359 aaKnown RBP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 MKKSQ9NPJ1 570 aaPredicted RBP1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 TMEM160Q9NX00 188 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 ASIC3Q9UHC3 531 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 PADI3Q9ULW8 664 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 DAAM1Q9Y4D1 1078 aa1.34□□□□□ -2.19
RNU4-43P-201ENST00000410628 CROCCQ5TZA2 2017 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 A0A0G2JLW4 131 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 GOLGA6L3A6NEY3 463 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 A6NL46 340 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 A8MU10 97 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 PLOD2O00469 737 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 ACKR2O00590 384 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 ZNHIT1O43257 154 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 SYNCRIPO60506 623 aaKnown RBP1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 CTSVO60911 334 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 DUS4LO95620 317 aaKnown RBP1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 CAVIN2O95810 425 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 TSHBP01222 138 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 NR3C1P04150 777 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 TRIM27P14373 513 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 CAPN2P17655 700 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 GPTP24298 496 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 SHC1P29353 583 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 CDC25CP30307 473 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 NR1H2P55055 460 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 TRA2BP62995 288 aaKnown RBP1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 COX10Q12887 443 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 CUL4BQ13620 913 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 ZNF234Q14588 700 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 SMAD1Q15797 465 aaKnown RBP1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 UGP2Q16851 508 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 SGO1Q5FBB7 561 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 CCNYL2Q5T2Q4 361 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 TRNP1Q6NT89 227 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 DUS1LQ6P1R4 473 aaKnown RBP1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 XRRA1Q6P2D8 792 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 SH2D5Q6ZV89 423 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 GPAT4Q86UL3 456 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 TDRPQ86YL5 185 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 FAM177A1Q8N128 213 aaPredicted RBP1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 ZNF527Q8NB42 609 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 SCCPDHQ8NBX0 429 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 RBM15BQ8NDT2 890 aaKnown RBP1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 OR5R1Q8NH85 324 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 PIGTQ969N2 578 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 OTULINQ96BN8 352 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 RHBDF1Q96CC6 855 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 EID2BQ96D98 161 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 PRAC1Q96KF2 57 aa1.33□□□□□ -2.2
RNU4-43P-201ENST00000410628 SIN3AQ96ST3 1273 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms