RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 ACOX1Q15067 660 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 PTPRRQ15256 657 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 PARP6Q2NL67 630 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 INAVAQ3KP66 663 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 SIRPB2Q5JXA9 342 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 ZNF569Q5MCW4 686 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 ADAMTSL4Q6UY14 1074 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 Q6ZVL8 140 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 TMC3Q7Z5M5 1100 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 NAXDQ8IW45 347 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.98□□□□□ -0.17
GYPC-203ENST00000409836 PAF1Q8N7H5 531 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 ACTRT1Q8TDG2 376 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 EID2BQ96D98 161 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 SMIM14Q96QK8 99 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 WDR24Q96S15 920 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 FSD1LQ9BXM9 530 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 TRMT1Q9NXH9 659 aaKnown RBP13.98□□□□□ -0.17
GYPC-203ENST00000409836 PCOLCE2Q9UKZ9 415 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 DRG1Q9Y295 367 aaKnown RBP13.98□□□□□ -0.17
GYPC-203ENST00000409836 ZNF711Q9Y462 761 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
GYPC-203ENST00000409836 DGKBQ9Y6T7 804 aa13.98□□□□□ -0.17
GYPC-203ENST00000409836 TNFRSF10CO14798 259 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 PIAS2O75928 621 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 MYCLP1P12525 358 aaPredicted RBP13.97□□□□□ -0.17
GYPC-203ENST00000409836 CXCR5P32302 372 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 EIF2B5Q13144 721 aaKnown RBP13.97□□□□□ -0.17
GYPC-203ENST00000409836 PDE1CQ14123 709 aaPredicted RBP13.97□□□□□ -0.17
GYPC-203ENST00000409836 INPP5AQ14642 412 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 PCSK7Q16549 785 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 FAM182AQ5T1J6 154 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 PAPD7Q5XG87 772 aaKnown RBP13.97□□□□□ -0.17
GYPC-203ENST00000409836 PDPK2PQ6A1A2 396 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 PNCKQ6P2M8 343 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 KDM7AQ6ZMT4 941 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 ARHGEF18Q6ZSZ5 1173 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 ERMP1Q7Z2K6 904 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 LYSMD3Q7Z3D4 306 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 PELI3Q8N2H9 469 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 TTC30BQ8N4P2 665 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 PRELID2Q8N945 189 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 PLA2G15Q8NCC3 412 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 IPMKQ8NFU5 416 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 ATL2Q8NHH9 583 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 SCARF2Q96GP6 870 aaPredicted RBP13.97□□□□□ -0.17
GYPC-203ENST00000409836 PLEKHG4BQ96PX9 1271 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 OSBPL9Q96SU4 736 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 NAP1L3Q99457 506 aaPredicted RBP13.97□□□□□ -0.17
GYPC-203ENST00000409836 APOOQ9BUR5 198 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 WDR26Q9H7D7 661 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 ZFYVE1Q9HBF4 777 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 RAD18Q9NS91 495 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 UBP1Q9NZI7 540 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 PNMA8BQ9ULN7 279 aaPredicted RBP13.97□□□□□ -0.17
GYPC-203ENST00000409836 SPO11Q9Y5K1 396 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 CSNK1G3Q9Y6M4 447 aa13.97□□□□□ -0.17
GYPC-203ENST00000409836 GOLGA6CA6NDK9 693 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 GOLGA6BA6NDN3 693 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 K7ESM1 405 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 PGRMC1O00264 195 aaKnown RBP13.96□□□□□ -0.17
GYPC-203ENST00000409836 FANCGO15287 622 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 CEP104O60308 925 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 PPFIA2O75334 1257 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 SUN1O94901 812 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 DKK1O94907 266 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 CLDN7O95471 211 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 METTL18O95568 372 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 AP2A1O95782 977 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 PCCBP05166 539 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 GOLGA6DP0CG33 693 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 TCP1P17987 556 aaKnown RBP13.96□□□□□ -0.17
GYPC-203ENST00000409836 KELP23276 732 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 PSMA3P25788 255 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 CHRNA4P43681 627 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 THOP1P52888 689 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 HNRNPKP61978 463 aaKnown RBP eCLIP13.96□□□□□ -0.172e-11■■■■□ 21
GYPC-203ENST00000409836 SEMA5AQ13591 1074 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 PRPSAP1Q14558 356 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 SUZ12Q15022 739 aaKnown RBP13.96□□□□□ -0.17
GYPC-203ENST00000409836 DENND5AQ6IQ26 1287 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 C4orf22Q6V702 233 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 SDR16C5Q8N3Y7 309 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 CCHCR1Q8TD31 782 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 C1orf54Q8WWF1 131 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 FUBP1Q96AE4 644 aaKnown RBP13.96□□□□□ -0.17
GYPC-203ENST00000409836 COX14Q96I36 57 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 WDR92Q96MX6 357 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 FRMD8Q9BZ67 464 aaPredicted RBP13.96□□□□□ -0.17
GYPC-203ENST00000409836 ABCG8Q9H221 673 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 GOLGA6AQ9NYA3 693 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 PKD2L2Q9NZM6 624 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 BPTFQ12830 3046 aa13.96□□□□□ -0.17
GYPC-203ENST00000409836 ARHGEF17Q96PE2 2063 aaPredicted RBP13.95□□□□□ -0.18
GYPC-203ENST00000409836 SPEGQ15772 3267 aa13.95□□□□□ -0.18
GYPC-203ENST00000409836 A8MX80 341 aa13.95□□□□□ -0.18
GYPC-203ENST00000409836 H3BM21 787 aa13.95□□□□□ -0.18
GYPC-203ENST00000409836 GIMD1P0DJR0 217 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms