RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 NEMP2A6NFY4 417 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 F5H423 210 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-205ENST00000409810 ENC1O14682 589 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 LIASO43766 372 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 SH3BP5O60239 455 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 GCATO75600 419 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 CLDN7O95471 211 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 FGGP02679 453 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 CSF2P04141 144 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 C1SP09871 688 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 ALPPL2P10696 532 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 JUNDP17535 347 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 GM2AP17900 193 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 GPR1P46091 355 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 PPARDQ03181 441 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 SHBQ15464 509 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 LONRF2Q1L5Z9 754 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 PRAMEF14Q5SWL7 426 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 FAM182AQ5T1J6 154 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 PNCKQ6P2M8 343 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 DRICH1Q6PGQ1 229 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-205ENST00000409810 ENPP7Q6UWV6 458 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 Q6ZVL8 140 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 TECPR1Q7Z6L1 1165 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 NLRP8Q86W28 1048 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 PHACTR4Q8IZ21 702 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 CBARPQ8N350 705 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-205ENST00000409810 CCDC89Q8N998 374 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 FAM71DQ8N9W8 422 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 RHBDD1Q8TEB9 315 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 SAP25Q8TEE9 199 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 ATG4AQ8WYN0 398 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 OXNAD1Q96HP4 312 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-205ENST00000409810 MRGPRX2Q96LB1 330 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 TBATAQ96M53 351 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 WDR92Q96MX6 357 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 CDC6Q99741 560 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 GPR63Q9BZJ6 419 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 CDH19Q9H159 772 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 SPASTQ9UBP0 616 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 KLQ9UEF7 1012 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 APOBEC3BQ9UH17 382 aaKnown RBP10.89□□□□□ -0.67
CHMP3-205ENST00000409810 PCOLCE2Q9UKZ9 415 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 ZNF148Q9UQR1 794 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 ZNF711Q9Y462 761 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 OR1A2Q9Y585 309 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 GOLGA8CPA6NN73 597 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 PSMD3O43242 534 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SDC3O75056 442 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 PIAS2O75928 621 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 RASGRP1O95267 797 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SLC4A1P02730 911 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 ATXN1LP0C7T5 689 aaKnown RBP10.88□□□□□ -0.67
CHMP3-205ENST00000409810 MYCLP1P12525 358 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-205ENST00000409810 TRIM23P36406 574 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 FDFT1P37268 417 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SPINT3P49223 89 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 DCDC1P59894 354 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 CDK3Q00526 305 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 OASLQ15646 514 aaKnown RBP10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SLC1A5Q15758 541 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 CCNG2Q16589 344 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 PARP6Q2NL67 630 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SIRPB2Q5JXA9 342 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 FAXCQ5TGI0 409 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 ZDHHC20Q5W0Z9 365 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 LYSMD3Q7Z3D4 306 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 HEATR4Q86WZ0 1026 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 GATAD2AQ86YP4 633 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SLC25A41Q8N5S1 370 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 PLA2G15Q8NCC3 412 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 C1orf54Q8WWF1 131 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 FUBP1Q96AE4 644 aaKnown RBP10.88□□□□□ -0.67
CHMP3-205ENST00000409810 RTP4Q96DX8 246 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SMIM14Q96QK8 99 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 FICDQ9BVA6 458 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 DUSP23Q9BVJ7 150 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SLC13A1Q9BZW2 595 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 ABCG8Q9H221 673 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 EVA1BQ9NVM1 165 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 FTSJ1Q9UET6 329 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 FEZ2Q9UHY8 353 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-205ENST00000409810 CD84Q9UIB8 345 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 SHOC2Q9UQ13 582 aa10.88□□□□□ -0.67
CHMP3-205ENST00000409810 ZNF106Q9H2Y7 1883 aaKnown RBP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 CES2O00748 559 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 TNFRSF10CO14798 259 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 TNFP01375 233 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 IFNB1P01574 187 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 ATP1A1P05023 1023 aaKnown RBP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 PIRTP0C851 137 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 CTSEP14091 401 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 DGKAP23743 735 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 CXCR5P32302 372 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 GDF10P55107 478 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 SRP54P61011 504 aaKnown RBP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 BNIP3Q12983 259 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 EIF2B5Q13144 721 aaKnown RBP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 SNX1Q13596 522 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 PTPRRQ15256 657 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms