RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 ERVK-6Q9BXR3 956 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 UPF3AQ9H1J1 476 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 POLR3BQ9NW08 1133 aaPredicted RBP15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 CPA4Q9UI42 421 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 MYRFQ9Y2G1 1151 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 DNAJC15Q9Y5T4 150 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 F8W810 466 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 MAGEB3O15480 346 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 SIX3O95343 332 aaPredicted RBP15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 STAMBPO95630 424 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 CHRNA1P02708 482 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 ITGB1P05556 798 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 HSPA8P11142 646 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 CD1DP15813 335 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 ALDH3B2P48448 385 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 GALK1P51570 392 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 PLOD1Q02809 727 aaPredicted RBP15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 SIRPB2Q5JXA9 342 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 MARC1Q5VT66 337 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 ERMP1Q7Z2K6 904 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 PTGR2Q8N8N7 351 aaPredicted RBP15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 PCYOX1LQ8NBM8 494 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 GPATCH1Q9BRR8 931 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 AGO3Q9H9G7 860 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 PNPLA3Q9NST1 481 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 HACD3Q9P035 362 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 THEGQ9P2T0 379 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 DSEQ9UL01 958 aa15.17■□□□□ 0.02
LYSMD4-204ENST00000409796 SAC3D1A6NKF1 404 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 C9JVG2 144 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 TRMUO75648 421 aaKnown RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 CNTN5O94779 1100 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 CDK14O94921 469 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 ADARP55265 1226 aaKnown RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 FOXA1P55317 472 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 NFKB2Q00653 900 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 GRB7Q14451 532 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 NHSL2Q5HYW2 709 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 PPP4R4Q6NUP7 873 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 ZNF549Q6P9A3 640 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 SPATA2LQ8IUW3 424 aaPredicted RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 ALDH16A1Q8IZ83 802 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 UMODL1-AS1Q8N2C9 162 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 SNRNP27Q8WVK2 155 aaKnown RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 GAB3Q8WWW8 586 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 RMND5BQ96G75 393 aaPredicted RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 TBATAQ96M53 351 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 VPS45Q9NRW7 570 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 ARMC1Q9NVT9 282 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 MYADML2A6NDP7 307 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 M0QZQ0 153 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 OR4Q2P0C623 313 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 BMP2P12643 396 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 CAPN3P20807 821 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 SLC26A3P40879 764 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 NDST2P52849 883 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 TIAL1Q01085 375 aaKnown RBP eCLIP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 TSPY1Q01534 308 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 NRG1Q02297 640 aaPredicted RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 CACNB2Q08289 660 aaPredicted RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 PTPRCAPQ14761 206 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 VPS26BQ4G0F5 336 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 MRPL10Q7Z7H8 261 aaKnown RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 FIBCD1Q8N539 461 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 RSPH1Q8WYR4 309 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 TCF12Q99081 682 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 ANKRD60Q9BZ19 345 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 SP110Q9HB58 689 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 MID1IP1Q9NPA3 183 aa15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 UXTQ9UBK9 157 aaPredicted RBP15.16■□□□□ 0.02
LYSMD4-204ENST00000409796 BBIP1A8MTZ0 92 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 FAM155AB1AL88 458 aaPredicted RBP15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 UBXN8O00124 270 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 PIP5K1BO14986 540 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 LDB2O43679 373 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 HNRNPCP07910 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 UGT1A6P19224 532 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 FDXRP22570 491 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 CDH15P55291 814 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 YBX1P67809 324 aaKnown RBP15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 ALFQ53S48 1182 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 IRAK1BP1Q5VVH5 260 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 ZNF354CQ86Y25 554 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 SCN4BQ8IWT1 228 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 ZNF683Q8IZ20 524 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 PGBD5Q8N414 524 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 TWIST2Q8WVJ9 160 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 PSMG2Q969U7 264 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 NSUN5Q96P11 429 aaKnown RBP15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 SERPINB11Q96P15 392 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 CCM2LQ9NUG4 571 aaPredicted RBP15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 RSL24D1Q9UHA3 163 aaKnown RBP15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 EGFL7Q9UHF1 273 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 AURKCQ9UQB9 309 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 MGEA5O60502 916 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 GJB3O75712 270 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 ATXN1LP0C7T5 689 aaKnown RBP15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 RPL10P27635 214 aaKnown RBP15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 TMED1Q13445 227 aa15.15■□□□□ 0.02
LYSMD4-204ENST00000409796 CAPRIN1Q14444 709 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms