RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 GTSE1Q9NYZ3 720 aa20.1■□□□□ 0.81
USP39-204ENST00000409766 FCF1Q9Y324 198 aaKnown RBP20.1■□□□□ 0.81
USP39-204ENST00000409766 TRPC5OSA6NMA1 111 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 SLC22A2O15244 555 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 KRT36O76013 467 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 FGF18O76093 207 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 PSMG1O95456 288 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 CTSAP10619 480 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 RHOAP61586 193 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 CYP4F8P98187 520 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 TRMT5Q32P41 509 aaKnown RBP20.09■□□□□ 0.81
USP39-204ENST00000409766 RALGPS1Q5JS13 557 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 RPS27LQ71UM5 84 aaKnown RBP20.09■□□□□ 0.81
USP39-204ENST00000409766 DCAF4L2Q8NA75 395 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 PAWRQ96IZ0 340 aaKnown RBP20.09■□□□□ 0.81
USP39-204ENST00000409766 PANX3Q96QZ0 392 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 LRRC3Q9BY71 257 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 GSTO2Q9H4Y5 243 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 TNFRSF12AQ9NP84 129 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 MED16Q9Y2X0 877 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 UBA6A0AVT1 1052 aaPredicted RBP20.09■□□□□ 0.81
USP39-204ENST00000409766 FZD6O60353 706 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 MT-CO1P00395 513 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 CDKN1CP49918 316 aaPredicted RBP20.09■□□□□ 0.81
USP39-204ENST00000409766 PDAP1Q13442 181 aaKnown RBP20.09■□□□□ 0.81
USP39-204ENST00000409766 PTPRRQ15256 657 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 RCN1Q15293 331 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 SETMARQ53H47 684 aaPredicted RBP20.09■□□□□ 0.81
USP39-204ENST00000409766 TMC8Q8IU68 726 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 TTC30BQ8N4P2 665 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 MAB21L3Q8N8X9 362 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 KCNV2Q8TDN2 545 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 BHMTQ93088 406 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 TACO1Q9BSH4 297 aaKnown RBP20.09■□□□□ 0.81
USP39-204ENST00000409766 RTKNQ9BST9 563 aa20.09■□□□□ 0.81
USP39-204ENST00000409766 SDHDO14521 159 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 CIB2O75838 187 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 CD1EP15812 388 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 ITGAXP20702 1163 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 PIK3R1P27986 724 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 ADSLP30566 484 aaPredicted RBP20.08■□□□□ 0.8
USP39-204ENST00000409766 FMO4P31512 558 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 PPARGP37231 505 aaPredicted RBP20.08■□□□□ 0.8
USP39-204ENST00000409766 GTF2A1P52655 376 aaPredicted RBP20.08■□□□□ 0.8
USP39-204ENST00000409766 ACTR3P61158 418 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 PEX6Q13608 980 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 ZNF678Q5SXM1 525 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 TMEM198Q66K66 360 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 FBXO46Q6PJ61 603 aaPredicted RBP20.08■□□□□ 0.8
USP39-204ENST00000409766 RIPOR1Q6ZS17 1223 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 CUZD1Q86UP6 607 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 HS6ST3Q8IZP7 471 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 EFHBQ8N7U6 833 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 RHEBL1Q8TAI7 183 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 ACTRT2Q8TDY3 377 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 MRPS31Q92665 395 aaKnown RBP20.08■□□□□ 0.8
USP39-204ENST00000409766 FAM136AQ96C01 138 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 FAR2Q96K12 515 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 TRMOQ9BU70 441 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 C11orf49Q9H6J7 331 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 STK39Q9UEW8 545 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 FKBPLQ9UIM3 349 aa20.08■□□□□ 0.8
USP39-204ENST00000409766 LSM7Q9UK45 103 aaKnown RBP20.08■□□□□ 0.8
USP39-204ENST00000409766 H3BMM5 538 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 KIAA0355O15063 1070 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 NDUFS3O75489 264 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 CKMP06732 381 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 LINC00271P0C7V0 271 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 THRAP10827 490 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 PTDSS1P48651 473 aaKnown RBP20.07■□□□□ 0.8
USP39-204ENST00000409766 SLC7A9P82251 487 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 BTKQ06187 659 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 OR4D1Q15615 310 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 ATXN7L2Q5T6C5 722 aaPredicted RBP20.07■□□□□ 0.8
USP39-204ENST00000409766 NXNQ6DKJ4 435 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 HTR3DQ70Z44 454 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 MFN1Q8IWA4 741 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.07■□□□□ 0.8
USP39-204ENST00000409766 PIANPQ8IYJ0 282 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 APCDD1Q8J025 514 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 TTC16Q8NEE8 873 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 STMN2Q93045 179 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 BIRC8Q96P09 236 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 TAS2R13Q9NYV9 303 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 ARHGAP26Q9UNA1 814 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 RGSL1A5PLK6 1076 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 H7C0S8 307 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 K7ERQ8 282 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 SRP72O76094 671 aaKnown RBP20.07■□□□□ 0.8
USP39-204ENST00000409766 BAIAP3O94812 1187 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 RHOBTB1O94844 696 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 RAG1P15918 1043 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 MC4RP32245 332 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 CA8P35219 290 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 GJA8P48165 433 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 HERVK_113P63132 956 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 SATB1Q01826 763 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 CUL3Q13618 768 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 C6orf163Q5TEZ5 329 aa20.07■□□□□ 0.8
USP39-204ENST00000409766 PSAPL1Q6NUJ1 521 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms