RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 TBCCD1Q9NVR7 557 aa12.98□□□□□ -0.33
PTPRN-202ENST00000409251 IFT80Q9P2H3 777 aaPredicted RBP12.98□□□□□ -0.33
PTPRN-202ENST00000409251 NOBOXO60393 691 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 CCL23P55773 120 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 SLC6A3Q01959 620 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 ANKRD26P1Q6NSI1 321 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 HMBOX1Q6NT76 420 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 DEFB128Q7Z7B8 93 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 LZTR1Q8N653 840 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 ITCHQ96J02 903 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 NPLQ9BXD5 320 aaPredicted RBP12.97□□□□□ -0.33
PTPRN-202ENST00000409251 MOSPD1Q9UJG1 213 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 TRPV2Q9Y5S1 764 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 NCF1BA6NI72 391 aaPredicted RBP12.97□□□□□ -0.33
PTPRN-202ENST00000409251 C2CD4BA6NLJ0 364 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 NCF1CA8MVU1 366 aaPredicted RBP12.97□□□□□ -0.33
PTPRN-202ENST00000409251 PQBP1O60828 265 aaKnown RBP12.97□□□□□ -0.33
PTPRN-202ENST00000409251 PMPCBO75439 489 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 NCF1P14598 390 aaPredicted RBP12.97□□□□□ -0.33
PTPRN-202ENST00000409251 HARS2P49590 506 aaKnown RBP12.97□□□□□ -0.33
PTPRN-202ENST00000409251 INPP5AQ14642 412 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 TIGD2Q4W5G0 525 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 RALGPS2Q86X27 583 aaPredicted RBP12.97□□□□□ -0.33
PTPRN-202ENST00000409251 MIER2Q8N344 545 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 RSPH1Q8WYR4 309 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 HDAC10Q969S8 669 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 TUBGCP3Q96CW5 907 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 ASB9Q96DX5 294 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 MUS81Q96NY9 551 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 ABI2Q9NYB9 513 aaPredicted RBP12.97□□□□□ -0.33
PTPRN-202ENST00000409251 USP22Q9UPT9 525 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 PLXNA1Q9UIW2 1896 aa12.97□□□□□ -0.33
PTPRN-202ENST00000409251 TCRBV5S1A1TA0A578 114 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 SEPT4O43236 478 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 DDHD2O94830 711 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 NADKO95544 446 aaPredicted RBP12.96□□□□□ -0.33
PTPRN-202ENST00000409251 C1QAP02745 245 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 CYBAP13498 195 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 ZNF12P17014 697 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 PSMB9P28065 219 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 ITKQ08881 620 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 PLA2G4EQ3MJ16 856 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 RABL3Q5HYI8 236 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 RWDD4Q6NW29 188 aaKnown RBP12.96□□□□□ -0.33
PTPRN-202ENST00000409251 ZNF280BQ86YH2 543 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 PCED1BQ96HM7 432 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 HNRNPABQ99729 332 aaKnown RBP12.96□□□□□ -0.33
PTPRN-202ENST00000409251 ACOT9Q9Y305 439 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 SNX5Q9Y5X3 404 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 G3V2L1 256 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 GRID2O43424 1007 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 JCHAINP01591 159 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 CD4P01730 458 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 HMBSP08397 361 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 IL4RP24394 825 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 NMBRP28336 390 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 PRDX6P30041 224 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 RSBN1Q5VWQ0 802 aaPredicted RBP12.96□□□□□ -0.33
PTPRN-202ENST00000409251 LIPMQ5VYY2 423 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 SCAIQ8N9R8 606 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 SCLYQ96I15 445 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 DMRTB1Q96MA1 342 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 ZNF560Q96MR9 790 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 TMEM74Q96NL1 305 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 LHX5Q9H2C1 402 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 CACNA2D2Q9NY47 1150 aa12.96□□□□□ -0.33
PTPRN-202ENST00000409251 YJEFN3A6XGL0 299 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 DLX3O60479 287 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 SNRPB2P08579 225 aaKnown RBP12.96□□□□□ -0.34
PTPRN-202ENST00000409251 PABPC1P11940 636 aaKnown RBP12.96□□□□□ -0.34
PTPRN-202ENST00000409251 CYP4B1P13584 511 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 COPZ1P61923 177 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 LAPTM5Q13571 262 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 INAQ16352 499 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 UBE2UQ5VVX9 321 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 CARM1Q86X55 608 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 SYTL1Q8IYJ3 562 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 OR6P1Q8NGX9 317 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 SLC35F5Q8WV83 523 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 LRRC39Q96DD0 335 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 C6orf62Q9GZU0 229 aaPredicted RBP12.96□□□□□ -0.34
PTPRN-202ENST00000409251 MOCS1Q9NZB8 636 aa12.96□□□□□ -0.34
PTPRN-202ENST00000409251 A0A0A0MRY4 1105 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 TSHRP16473 764 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 GLDCP23378 1020 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 CNTFP26441 200 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 PTPN9P43378 593 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 SV2CQ496J9 727 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 SLC22A16Q86VW1 577 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 ABI1Q8IZP0 508 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 CADM3Q8N126 398 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 TNIP2Q8NFZ5 429 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 ACDQ96AP0 544 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 NSMCE3Q96MG7 304 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 SPATA13Q96N96 652 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 CSPG4P5Q96PW8 444 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 IL12RB2Q99665 862 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 CPNE1Q99829 537 aa12.95□□□□□ -0.34
PTPRN-202ENST00000409251 CRTAC1Q9NQ79 661 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms