RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NR2C2P49116 596 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 CLDN6P56747 220 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 TAS2R40P59535 323 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 CDK3Q00526 305 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 GBE1Q04446 702 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 PPIDQ08752 370 aaKnown RBP9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 LRP8Q14114 963 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 SLC14A2Q15849 920 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 C14orf28Q4W4Y0 310 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 LRRC66Q68CR7 880 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 SLC9A4Q6AI14 798 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC70Q6NSX1 233 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 ADAMTSL4Q6UY14 1074 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 PDZD3Q86UT5 571 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 MARCH9Q86YJ5 346 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 RFX6Q8HWS3 928 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC170Q8IYT3 715 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 TXLNBQ8N3L3 684 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 PQLC3Q8N755 202 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 KYQ8NBH2 561 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 PLA2G15Q8NCC3 412 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 FAM46DQ8NEK8 389 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 WDR36Q8NI36 951 aaKnown RBP9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 PIH1D2Q8WWB5 315 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 OR1E3Q8WZA6 343 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC74AQ96AQ1 378 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 TMEM159Q96B96 161 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 AP2M1Q96CW1 435 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 TMEM74Q96NL1 305 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 GFM1Q96RP9 751 aaKnown RBP9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 LYSMD1Q96S90 227 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 LGMNQ99538 433 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 DPEP2Q9H4A9 486 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 PCDH9Q9HC56 1237 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 SPTLC3Q9NUV7 552 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 DTLQ9NZJ0 730 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 AKAP7Q9P0M2 348 aaPredicted RBP9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 SIRPGQ9P1W8 387 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 PCDHGA8Q9Y5G5 932 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 HEY1Q9Y5J3 304 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 ZFYVE26Q68DK2 2539 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 LRP4O75096 1905 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 MYLKQ15746 1914 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 C1orf232A0A0U1RR37 186 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 EIF4E1BA6NMX2 242 aaKnown RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 B4DGG1 531 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 D6RAR5 112 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 NUDT21O43809 227 aaKnown RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 HLA-DQB2P05538 268 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 SLC2A4P14672 509 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 CTPS1P17812 591 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 TGM2P21980 687 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 LHCGRP22888 699 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 MAGEA1P43355 309 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 NOP2P46087 812 aaKnown RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 HADHBP55084 474 aaKnown RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 DSC2Q02487 901 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 AP1B1Q10567 949 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 COL28A1Q2UY09 1125 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 ATP13A4Q4VNC1 1196 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 C3orf38Q5JPI3 329 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 CERCAMQ5T4B2 595 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 OGFOD3Q6PK18 319 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 C19orf48Q6RUI8 117 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 Q6ZVL8 140 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 HSD11B1LQ7Z5J1 315 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 TECPR1Q7Z6L1 1165 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 CBARPQ8N350 705 aaPredicted RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 AVL9Q8NBF6 648 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 LPCAT1Q8NF37 534 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 GPR156Q8NFN8 814 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 EXD1Q8NHP7 514 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 HNRNPLLQ8WVV9 542 aaKnown RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 RAPGEF5Q92565 580 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 LIN37Q96GY3 246 aaPredicted RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 RBM41Q96IZ5 413 aaKnown RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 OR2M4Q96R27 311 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 CHP1Q99653 195 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 FRMD8Q9BZ67 464 aaPredicted RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 STN1Q9H668 368 aaKnown RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 VPS18Q9P253 973 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 APPL1Q9UKG1 709 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 PNMA8BQ9ULN7 279 aaPredicted RBP9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 SLC17A4Q9Y2C5 497 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 PCDHB1Q9Y5F3 818 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 CFAP47Q6ZTR5 3102 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 ASPMQ8IZT6 3477 aa9.06□□□□□ -0.96
SNORD88A-201ENST00000408314 ADAMTS20P59510 1910 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 A0A0A6YYK5 440 aaPredicted RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 TTC24A2A3L6 582 aaPredicted RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 RHPN2P1A8MT19 583 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 ANKRD66B4E2M5 251 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 GPR89AB7ZAQ6 455 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 NTN3O00634 580 aaPredicted RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 JCHAINP01591 159 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 MPOP05164 745 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 RPLP0P05388 317 aaKnown RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 CELA2BP08218 269 aaPredicted RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 ITGA2BP08514 1039 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 GPR89BP0CG08 455 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms