RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 RTP4Q96DX8 246 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 IFT43Q96FT9 208 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 TSGA13Q96PP4 275 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 QKIQ96PU8 341 aaKnown RBP eCLIP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 PCDH9Q9HC56 1237 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 MBNL1Q9NR56 388 aaKnown RBP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 DMGDHQ9UI17 866 aaKnown RBP16.54■□□□□ 0.24
CGREF1-205ENST00000404694 NEU2Q9Y3R4 380 aa16.54■□□□□ 0.24
CGREF1-205ENST00000404694 GOLGA8CPA6NN73 597 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 MATN3O15232 486 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 DGKAP23743 735 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 CCNCP24863 283 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 SLC7A5Q01650 507 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 GUCY2DQ02846 1103 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 TRAF2Q12933 501 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 AGERQ15109 404 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 ZNF542PQ5EBM4 170 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 PARGQ86W56 976 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 SLC25A45Q8N413 288 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 BBOF1Q8ND07 529 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 PDCD6IPQ8WUM4 868 aaKnown RBP16.53■□□□□ 0.24
CGREF1-205ENST00000404694 LRRN4Q8WUT4 740 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 HDAC11Q96DB2 347 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 CNDP2Q96KP4 475 aaKnown RBP16.53■□□□□ 0.24
CGREF1-205ENST00000404694 POLR1EQ9GZS1 481 aaKnown RBP16.53■□□□□ 0.24
CGREF1-205ENST00000404694 EPB41L5Q9HCM4 733 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 ARFGAP3Q9NP61 516 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 UCKL1Q9NWZ5 548 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 DNAJC28Q9NX36 388 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 KLK13Q9UKR3 277 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 PTPRBP23467 1997 aa16.53■□□□□ 0.24
CGREF1-205ENST00000404694 A0A1W2PQ67 120 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 PIAS2O75928 621 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 STK10O94804 968 aaKnown RBP16.52■□□□□ 0.24
CGREF1-205ENST00000404694 LDOC1O95751 146 aaPredicted RBP16.52■□□□□ 0.24
CGREF1-205ENST00000404694 CPP00450 1065 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 KRT14P02533 472 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 ACTN2P35609 894 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 LRRC14Q15048 493 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 PRKD1Q15139 912 aaPredicted RBP16.52■□□□□ 0.24
CGREF1-205ENST00000404694 WSCD2Q2TBF2 565 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 ALG1LQ6GMV1 187 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 DPPA4Q7L190 304 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 ZC3H18Q86VM9 953 aaKnown RBP16.52■□□□□ 0.24
CGREF1-205ENST00000404694 SEMA3CQ99985 751 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 FAM118BQ9BPY3 351 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 TMEM121Q9BTD3 319 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 NEUROG3Q9Y4Z2 214 aa16.52■□□□□ 0.24
CGREF1-205ENST00000404694 ATP8B1O43520 1251 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 LZTS3O60299 673 aaPredicted RBP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 CSF2P04141 144 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 ELFN1P0C7U0 828 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 CCNB1P14635 433 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 NME1P15531 152 aaKnown RBP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 THOP1P52888 689 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 HNRNPKP61978 463 aaKnown RBP eCLIP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 YPEL5P62699 121 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 VSNL1P62760 191 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 CAV1Q03135 178 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 PPIDQ08752 370 aaKnown RBP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 P3H1Q32P28 736 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 LIPIQ6XZB0 460 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 CCNYQ8ND76 341 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 LRRC45Q96CN5 670 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 USP29Q9HBJ7 922 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 WHRNQ9P202 907 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 B4GALT6Q9UBX8 382 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 ASIC3Q9UHC3 531 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 TTLL3Q9Y4R7 772 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 FREM2Q5SZK8 3169 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 MAP1BP46821 2468 aaKnown RBP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 C5orf60A6NFR6 353 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 SMAPO00193 183 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 TOR1BO14657 336 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 RECQL5O94762 991 aaPredicted RBP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 PGLSO95336 258 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 GM2AP17900 193 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 DSC2Q02487 901 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 ITKQ08881 620 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 EIF2B5Q13144 721 aaKnown RBP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 DNAJC3Q13217 504 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 PTK2BQ14289 1009 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 CCNI2Q6ZMN8 369 aaPredicted RBP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 PCGF5Q86SE9 256 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 CCDC13Q8IYE1 715 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 HTR3CQ8WXA8 447 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 SNF8Q96H20 258 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 VAT1Q99536 393 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 LGMNQ99538 433 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 TRIM51Q9BSJ1 452 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 TMEM121BQ9BXQ6 578 aaPredicted RBP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 HAUS2Q9NVX0 235 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 RBM22Q9NW64 420 aaKnown RBP eCLIP16.51■□□□□ 0.23
CGREF1-205ENST00000404694 PAK5Q9P286 719 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 KLF15Q9UIH9 416 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 PHTF1Q9UMS5 762 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 MSRB2Q9Y3D2 182 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 RAI2Q9Y5P3 530 aa16.51■□□□□ 0.23
CGREF1-205ENST00000404694 LRP4O75096 1905 aa16.5■□□□□ 0.23
CGREF1-205ENST00000404694 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms