RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RGSL1A5PLK6 1076 aa29.29■■■□□ 2.28
USP42-202ENST00000404008 BCAT2O15382 392 aaPredicted RBP29.29■■■□□ 2.28
USP42-202ENST00000404008 SEC31AO94979 1220 aaKnown RBP29.29■■■□□ 2.28
USP42-202ENST00000404008 RPL21P46778 160 aaKnown RBP29.29■■■□□ 2.28
USP42-202ENST00000404008 RACK1P63244 317 aaKnown RBP29.29■■■□□ 2.28
USP42-202ENST00000404008 POU6F1Q14863 301 aa29.29■■■□□ 2.28
USP42-202ENST00000404008 IRF4Q15306 451 aa29.29■■■□□ 2.28
USP42-202ENST00000404008 CERCAMQ5T4B2 595 aa29.29■■■□□ 2.28
USP42-202ENST00000404008 NRSN1Q8IZ57 195 aa29.29■■■□□ 2.28
USP42-202ENST00000404008 ARRDC1-AS1Q9H2J1 176 aa29.29■■■□□ 2.28
USP42-202ENST00000404008 SUSD2Q9UGT4 822 aa29.29■■■□□ 2.28
USP42-202ENST00000404008 CA5BQ9Y2D0 317 aa29.29■■■□□ 2.28
USP42-202ENST00000404008 CRTAMO95727 393 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 RETP07949 1114 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 GNSP15586 552 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 IGFALSP35858 605 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 DUPD1Q68J44 220 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 GCNT7Q6ZNI0 430 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 ZNF765Q7L2R6 523 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 CAND1Q86VP6 1230 aaKnown RBP29.28■■■□□ 2.28
USP42-202ENST00000404008 RAB17Q9H0T7 212 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 ABCG8Q9H221 673 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 IL17CQ9P0M4 197 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 CD84Q9UIB8 345 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 SNX24Q9Y343 169 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 UTP11Q9Y3A2 253 aaKnown RBP29.28■■■□□ 2.28
USP42-202ENST00000404008 HS3ST3A1Q9Y663 406 aa29.28■■■□□ 2.28
USP42-202ENST00000404008 A0A1B0GTW7 788 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 C2orf81A6NN90 581 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 GOLGA8MH3BSY2 632 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 LDB2O43679 373 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 MLNP12872 115 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 MPLP40238 635 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 CLDN2P57739 230 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 PDE1BQ01064 536 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 DPTQ07507 201 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 STAT4Q14765 748 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 MORF4L2Q15014 288 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 PHOX2BQ99453 314 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 XAB2Q9HCS7 855 aaKnown RBP29.27■■■□□ 2.28
USP42-202ENST00000404008 AASDHPPTQ9NRN7 309 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 RALGAPA1Q6GYQ0 2036 aa29.27■■■□□ 2.28
USP42-202ENST00000404008 H0Y8X5 98 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 FPGTO14772 594 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 TP73O15350 636 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 BUD23O43709 281 aaKnown RBP29.26■■■□□ 2.28
USP42-202ENST00000404008 LPOP22079 712 aaPredicted RBP29.26■■■□□ 2.28
USP42-202ENST00000404008 AFF3P51826 1226 aaKnown RBP29.26■■■□□ 2.28
USP42-202ENST00000404008 SESN2P58004 480 aaPredicted RBP29.26■■■□□ 2.28
USP42-202ENST00000404008 HIBCHQ6NVY1 386 aaPredicted RBP29.26■■■□□ 2.28
USP42-202ENST00000404008 ESRP1Q6NXG1 681 aaKnown RBP29.26■■■□□ 2.28
USP42-202ENST00000404008 PLA2G15Q8NCC3 412 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 BMFQ96LC9 184 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 SERPINB12Q96P63 405 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 RANBP9Q96S59 729 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 DPH5Q9H2P9 285 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 BPIFA1Q9NP55 256 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 NFKBIL1Q9UBC1 381 aaPredicted RBP29.26■■■□□ 2.28
USP42-202ENST00000404008 GMEB2Q9UKD1 530 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 PKP3Q9Y446 797 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 KCTD3Q9Y597 815 aa29.26■■■□□ 2.28
USP42-202ENST00000404008 POM121BA6NF01 834 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 PRR5-ARHGAP8B1AHC4 643 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 AVILO75366 819 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 PCCBP05166 539 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 BPIP17213 487 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 CD38P28907 300 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 NPY2RP49146 381 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 ZNF140P52738 457 aaPredicted RBP29.26■■■□□ 2.27
USP42-202ENST00000404008 ITGA8P53708 1063 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 DCDC1P59894 354 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 SLC7A5Q01650 507 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 SEPT6Q14141 434 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 RABEPKQ7Z6M1 372 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 ABI3BPQ7Z7G0 1075 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 NLRP8Q86W28 1048 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 PELI3Q8N2H9 469 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 GPR26Q8NDV2 337 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 SCAMP4Q969E2 229 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 AP2M1Q96CW1 435 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 RAD18Q9NS91 495 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 WHRNQ9P202 907 aa29.26■■■□□ 2.27
USP42-202ENST00000404008 PI4KAP42356 2102 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 A0A1W2PR77 199 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 MROH6A6NGR9 719 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 K7ESM1 405 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 SMAPO00193 183 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 PPFIA2O75334 1257 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 MAGEA3P43357 314 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 MTM1Q13496 603 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 PTPRCAPQ14761 206 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 CCDC38Q502W7 563 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 PLA2G2CQ5R387 149 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 HENMT1Q5T8I9 393 aaKnown RBP29.25■■■□□ 2.27
USP42-202ENST00000404008 KYAT3Q6YP21 454 aaKnown RBP29.25■■■□□ 2.27
USP42-202ENST00000404008 KDM7AQ6ZMT4 941 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 MFSD2AQ8NA29 543 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 BBOF1Q8ND07 529 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 CEP76Q8TAP6 659 aa29.25■■■□□ 2.27
USP42-202ENST00000404008 FAM174AQ8TBP5 190 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms