RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMEM51Q9NW97 253 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TRNAU1APQ9NX07 287 aaKnown RBP11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 UBA2Q9UBT2 640 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 B4GALT6Q9UBX8 382 aa11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TMEM184BQ9Y519 407 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ZNF106Q9H2Y7 1883 aaKnown RBP11.88□□□□□ -0.51
SPTLC1P3-201ENST00000403408 HIVEP1P15822 2718 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CAPN5O15484 640 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PRAMEF11O60813 436 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 STK17BO94768 372 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SOD1P00441 154 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ELFN1P0C7U0 828 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TNFAIP3P21580 790 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 MMP8P22894 467 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 KELP23276 732 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 MAP4P27816 1152 aaKnown RBP11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 EPHB2P29323 1055 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 STAT5AP42229 794 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PTPN9P43378 593 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 YBEYP58557 167 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ABHD18Q0P651 414 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CNGA3Q16281 694 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 MIIPQ5JXC2 388 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SNAP47Q5SQN1 464 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ARHGAP36Q6ZRI8 547 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 STRADAQ7RTN6 431 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CREBRFQ8IUR6 639 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TP53INP2Q8IXH6 220 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SLC30A5Q8TAD4 765 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 EPS8L1Q8TE68 723 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 FNIP1Q8TF40 1166 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NTAN1Q96AB6 310 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CELF6Q96J87 481 aaKnown RBP11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 GSDMCQ9BYG8 508 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NOCTQ9UK39 431 aaKnown RBP11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NF1P21359 2839 aa11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DIDO1Q9BTC0 2240 aaKnown RBP11.87□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DNAJB5O75953 348 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 AGFG2O95081 481 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 LSM8O95777 96 aaKnown RBP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CYP1A1P04798 512 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TCN2P20062 427 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 POU3F2P20265 443 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 LHCGRP22888 699 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SDC4P31431 198 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 RFC1P35251 1148 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 RAB15P59190 212 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CDK3Q00526 305 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 FMO1Q01740 532 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ILF3Q12906 894 aaKnown RBP eCLIP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ACOX1Q15067 660 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PARP15Q460N3 678 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CRTC2Q53ET0 693 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TCTN3Q6NUS6 607 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 HSD11B1LQ7Z5J1 315 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ATCAYQ86WG3 371 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ARHGAP12Q8IWW6 846 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SLC37A2Q8TED4 501 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SCARF2Q96GP6 870 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SMIM14Q96QK8 99 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TUBGCP5Q96RT8 1024 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PCDHB18PQ96TA0 734 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 C11orf70Q9BRQ4 267 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SLC39A8Q9C0K1 460 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PDCL3Q9H2J4 239 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SIDT1Q9NXL6 827 aaKnown RBP11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TLK1Q9UKI8 766 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DCHS2Q6V1P9 2916 aa11.86□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TCRBV5S1A1TA0A578 114 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CREB3O43889 395 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 MAP3K6O95382 1288 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CLDN1O95832 211 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 IVLP07476 585 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ETV3P41162 512 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ACTR1BP42025 376 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CSNK1DP48730 415 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PAPOLAP51003 745 aaKnown RBP11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 BPIFB4P59827 614 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ACTR1AP61163 376 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 RAPGEF1Q13905 1077 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PRR30Q53SZ7 412 aaPredicted RBP11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 KLHDC7AQ5VTJ3 777 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SMYD5Q6GMV2 418 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 WDR59Q6PJI9 974 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ASB18Q6ZVZ8 466 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TRIM74Q86UV6 250 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TEX19Q8NA77 164 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 GALNT11Q8NCW6 608 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CCDC112Q8NEF3 446 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SSC4DQ8WTU2 575 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 NUS1Q96E22 293 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TEFMQ96QE5 360 aaKnown RBP11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TRIM55Q9BYV6 548 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ATP13A3Q9H7F0 1226 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 FBXO8Q9NRD0 319 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TMEM98Q9Y2Y6 226 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms