RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CCDC70Q6NSX1 233 aa19.17■□□□□ 0.66
RTN4-207ENST00000402434 BTN2A2Q8WVV5 523 aa19.17■□□□□ 0.66
RTN4-207ENST00000402434 EID2BQ96D98 161 aa19.17■□□□□ 0.66
RTN4-207ENST00000402434 TBATAQ96M53 351 aa19.17■□□□□ 0.66
RTN4-207ENST00000402434 SRPK1Q96SB4 655 aaKnown RBP19.17■□□□□ 0.66
RTN4-207ENST00000402434 TEX101Q9BY14 249 aa19.17■□□□□ 0.66
RTN4-207ENST00000402434 FRMD8P1Q9BZ68 369 aaPredicted RBP19.17■□□□□ 0.66
RTN4-207ENST00000402434 ABCG8Q9H221 673 aa19.17■□□□□ 0.66
RTN4-207ENST00000402434 COL5A1P20908 1838 aaPredicted RBP19.17■□□□□ 0.66
RTN4-207ENST00000402434 RGSL1A5PLK6 1076 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 H3BM21 787 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 ATXN1LP0C7T5 689 aaKnown RBP19.16■□□□□ 0.66
RTN4-207ENST00000402434 JUNDP17535 347 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 PPARDQ03181 441 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 LYSMD3Q7Z3D4 306 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 EID2Q8N6I1 236 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 FAM71DQ8N9W8 422 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 ZNF548Q8NEK5 533 aaPredicted RBP19.16■□□□□ 0.66
RTN4-207ENST00000402434 CCDC110Q8TBZ0 833 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 CCHCR1Q8TD31 782 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 WDR92Q96MX6 357 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 LGR4Q9BXB1 951 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 WDR26Q9H7D7 661 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 ZFYVE1Q9HBF4 777 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 CSNK1G3Q9Y6M4 447 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 GOLGA4Q13439 2230 aaKnown RBP19.16■□□□□ 0.66
RTN4-207ENST00000402434 NEMP2A6NFY4 417 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 F5H423 210 aaPredicted RBP19.16■□□□□ 0.66
RTN4-207ENST00000402434 CACNB4O00305 520 aaPredicted RBP19.16■□□□□ 0.66
RTN4-207ENST00000402434 TNFRSF10CO14798 259 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 SCAMP1O15126 338 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 TNFSF14O43557 240 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 GCATO75600 419 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 MYCLP1P12525 358 aaPredicted RBP19.16■□□□□ 0.66
RTN4-207ENST00000402434 SPINT3P49223 89 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 GEMP55040 296 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 SLC1A5Q15758 541 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 TMC3Q7Z5M5 1100 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 KLHDC8BQ8IXV7 354 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 PHACTR4Q8IZ21 702 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 ATL2Q8NHH9 583 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 ATG4AQ8WYN0 398 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 SCAMP4Q969E2 229 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 AP2M1Q96CW1 435 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 RTP4Q96DX8 246 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 TMEM121Q9BTD3 319 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 AAR2Q9Y312 384 aaKnown RBP19.16■□□□□ 0.66
RTN4-207ENST00000402434 JRKLQ9Y4A0 524 aa19.16■□□□□ 0.66
RTN4-207ENST00000402434 TMEM202A6NGA9 273 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 PDE2AO00408 941 aaPredicted RBP19.15■□□□□ 0.66
RTN4-207ENST00000402434 TRIM38O00635 465 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 LIASO43766 372 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 SOD1P00441 154 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 PIRTP0C851 137 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 HLA-DPA1P20036 260 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 KELP23276 732 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 PSMB4P28070 264 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 STIP1P31948 543 aaKnown RBP19.15■□□□□ 0.66
RTN4-207ENST00000402434 BLKP51451 505 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 HK3P52790 923 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 OASLQ15646 514 aaKnown RBP19.15■□□□□ 0.66
RTN4-207ENST00000402434 ALG11Q2TAA5 492 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 SIRPB2Q5JXA9 342 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 FAXCQ5TGI0 409 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 ENPP7Q6UWV6 458 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 RANBP10Q6VN20 620 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 RBFAQ8N0V3 343 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 IPMKQ8NFU5 416 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 OR4C6Q8NH72 309 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 PPP1R2P1Q96PQ5 205 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 WDR24Q96S15 920 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 SLC13A1Q9BZW2 595 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 TCEAL2Q9H3H9 227 aaPredicted RBP19.15■□□□□ 0.66
RTN4-207ENST00000402434 TOR4AQ9NXH8 423 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 FTSJ1Q9UET6 329 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 APOBEC3BQ9UH17 382 aaKnown RBP19.15■□□□□ 0.66
RTN4-207ENST00000402434 CD84Q9UIB8 345 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 SPO11Q9Y5K1 396 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 DGKBQ9Y6T7 804 aa19.15■□□□□ 0.66
RTN4-207ENST00000402434 AQP9O43315 295 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 DKK1O94907 266 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 PYGLP06737 847 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 ADRA1AP35348 466 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 CHRNA4P43681 627 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 GDF10P55107 478 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 SRP54P61011 504 aaKnown RBP19.14■□□□□ 0.65
RTN4-207ENST00000402434 CDK3Q00526 305 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 SIX1Q15475 284 aaPredicted RBP19.14■□□□□ 0.65
RTN4-207ENST00000402434 RAET1GQ6H3X3 334 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 ADAMTSL4Q6UY14 1074 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 HEATR4Q86WZ0 1026 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 OR56A4Q8NGH8 313 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 TSACCQ96A04 125 aaPredicted RBP19.14■□□□□ 0.65
RTN4-207ENST00000402434 FSD1LQ9BXM9 530 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 CDH19Q9H159 772 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 FAM83DQ9H4H8 585 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 TRABDQ9H4I3 376 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 PHPT1Q9NRX4 125 aaPredicted RBP19.14■□□□□ 0.65
RTN4-207ENST00000402434 NLGN3Q9NZ94 848 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 PKD2L2Q9NZM6 624 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms