RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 MSLNQ13421 630 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SQLEQ14534 574 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ACAP2Q15057 778 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 PTPRNQ16849 979 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 MTX3Q5HYI7 312 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TECRLQ5HYJ1 363 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 REP15Q6BDI9 236 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 BHLHA9Q7RTU4 235 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 RNF180Q86T96 592 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 DHFR2Q86XF0 187 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CILP2Q8IUL8 1156 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 LRRC49Q8IUZ0 686 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 DENND1CQ8IV53 801 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CLYBLQ8N0X4 340 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 MYO1HQ8N1T3 1032 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SMYD1Q8NB12 490 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 OR4K2Q8NGD2 314 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 OR4L1Q8NH43 312 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 NAT14Q8WUY8 206 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ZNF419Q96HQ0 510 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 UROC1Q96N76 676 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 KCNA7Q96RP8 456 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TMEM79Q9BSE2 394 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 NOL11Q9H8H0 719 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ATP13A1Q9HD20 1204 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SPAG4Q9NPE6 437 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 NMRK2Q9NPI5 230 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 DDX18Q9NVP1 670 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TAS2R13Q9NYV9 303 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 LZTS1Q9Y250 596 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TMEM98Q9Y2Y6 226 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SH3GLB1Q9Y371 365 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ANGPTL3Q9Y5C1 460 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 PCDHB7Q9Y5E2 793 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 PLXNB2O15031 1838 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 A0A0D9SEW6 157 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 A0A0J9YYE9 177 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 C2orf81A6NN90 581 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 A8MX80 341 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 PPP6CO00743 305 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ZNF623O75123 536 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 OR6B1O95007 311 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 FAM58BPP0C7Q3 252 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 OXCT1P55809 520 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 RPS24P62847 133 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 RAD51Q06609 339 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ADGRE1Q14246 886 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 FRG1Q14331 258 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CMPK2Q5EBM0 449 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 RGMBQ6NW40 437 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 FAM117BQ6P1L5 589 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SLC24A5Q71RS6 500 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 BNIPLQ7Z465 357 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 IFNL1Q8IU54 200 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 HERC6Q8IVU3 1022 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SPPL2BQ8TCT7 592 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 C19orf60Q96EN9 201 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CCT7Q99832 543 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 C1orf50Q9BV19 199 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 PCDHB8Q9UN66 801 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 FAM149AA5PLN7 773 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 AZIN1O14977 448 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SLC7A4O43246 635 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 KATNA1O75449 491 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CRTAMO95727 393 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 RHOCP08134 193 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CKMT2P17540 419 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 RPL17P18621 184 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 IL10P22301 178 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 EEF1DP29692 281 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 HK2P52789 917 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 NDST2P52849 883 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TPD52P55327 224 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ZNF33AQ06730 810 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ZNF177Q13360 481 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 NFYCQ13952 458 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TRIM25Q14258 630 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TLR1Q15399 786 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ZNF423Q2M1K9 1284 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CNPY1Q3B7I2 92 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SGO1Q5FBB7 561 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TBCELQ5QJ74 424 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CST9Q5W186 159 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ANKS6Q68DC2 871 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 C16orf87Q6PH81 154 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 LINGO4Q6UY18 593 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 PCSK9Q8NBP7 692 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 ISL2Q96A47 359 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 IMP4Q96G21 291 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 NSUN5Q96P11 429 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 EGFL8Q99944 293 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SCUBE2Q9NQ36 999 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 UBAP1Q9NZ09 502 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 TRMT6Q9UJA5 497 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 NDUFAF1Q9Y375 327 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 A0A0U1RQS6 177 aa7.68□□□□□ -1.18
HDAC9-201ENST00000401921 TCAF2A6NFQ2 919 aa7.68□□□□□ -1.18
HDAC9-201ENST00000401921 TMEM221A6NGB7 291 aa7.68□□□□□ -1.18
HDAC9-201ENST00000401921 PIP5K1BO14986 540 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms