RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 CCSAPQ6IQ19 270 aaPredicted RBP11.38□□□□□ -0.59
C4orf3-201ENST00000399075 ZNF549Q6P9A3 640 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 ZNF280BQ86YH2 543 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 NAT14Q8WUY8 206 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 PRICKLE1Q96MT3 831 aaPredicted RBP11.38□□□□□ -0.59
C4orf3-201ENST00000399075 CYP2S1Q96SQ9 504 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 MRPS26Q9BYN8 205 aaKnown RBP11.38□□□□□ -0.59
C4orf3-201ENST00000399075 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.38□□□□□ -0.59
C4orf3-201ENST00000399075 TFB2MQ9H5Q4 396 aaKnown RBP11.38□□□□□ -0.59
C4orf3-201ENST00000399075 VCX3AQ9NNX9 186 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 COMMD8Q9NX08 183 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 CCDC167Q9P0B6 97 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 MARCH2Q9P0N8 246 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 PADI4Q9UM07 663 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 ITM2BQ9Y287 266 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 TLL2Q9Y6L7 1015 aa11.38□□□□□ -0.59
C4orf3-201ENST00000399075 GOT2P00505 430 aaKnown RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 ZNF26P17031 533 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 ZNF37AP17032 561 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 YWHAQP27348 245 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 SLC7A1P30825 629 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 KCNA10Q16322 511 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 TYSND1Q2T9J0 566 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 IL23RQ5VWK5 629 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 RAP1GAP2Q684P5 730 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 PAOXQ6QHF9 649 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 RPS27LQ71UM5 84 aaKnown RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 RAB44Q7Z6P3 723 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 PIM3Q86V86 326 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 FAM156AQ8NDB6 213 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 BRSK1Q8TDC3 778 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 TBATAQ96M53 351 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 SEMA3CQ99985 751 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 RETREG1Q9H6L5 497 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 PDFQ9HBH1 243 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 MTF2Q9Y483 593 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 PRORSD1PA6NEY8 169 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 GPX3P22352 226 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 GRK4P32298 578 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 CLLU1OSQ5K130 101 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 PRMT9Q6P2P2 845 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 SLC24A5Q71RS6 500 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 LDB1Q86U70 411 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 ZNF354CQ86Y25 554 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 PCYOX1LQ8NBM8 494 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 LPGAT1Q92604 370 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 FBXO32Q969P5 355 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 ATP6V1E2Q96A05 226 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 TLR8Q9NR97 1041 aaKnown RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 INTS10Q9NVR2 710 aaKnown RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 KCTD3Q9Y597 815 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 OR51F1A6NGY5 319 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 OR6C75A6NL08 312 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 TCN1P20061 433 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 KPNA1P52294 538 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 NAA20P61599 178 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 FAM189BP81408 668 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 SFSWAPQ12872 951 aaKnown RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 ZNF235Q14590 738 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 MGAT5BQ3V5L5 792 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 SPATS1Q496A3 300 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 C5orf22Q49AR2 442 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 C6orf10Q5SRN2 563 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 KANK2Q63ZY3 851 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 CLEC6AQ6EIG7 209 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 PBXIP1Q96AQ6 731 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 DNAJC1Q96KC8 554 aaKnown RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 ZNF597Q96LX8 424 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 RPRD1AQ96P16 312 aaPredicted RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 AARSD1Q9BTE6 412 aaKnown RBP11.37□□□□□ -0.59
C4orf3-201ENST00000399075 EFHD1Q9BUP0 239 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 CATSPERZQ9NTU4 200 aa11.37□□□□□ -0.59
C4orf3-201ENST00000399075 CHD5Q8TDI0 1954 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 CCDC162PA2VCL2 907 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 CCL22O00626 93 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 TRPA1O75762 1119 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 CDK14O94921 469 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 CLPTM1O96005 669 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 ALDOCP09972 364 aaKnown RBP11.36□□□□□ -0.59
C4orf3-201ENST00000399075 FAM58BPP0C7Q3 252 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 HSPA8P11142 646 aaKnown RBP11.36□□□□□ -0.59
C4orf3-201ENST00000399075 ARSAP15289 507 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 PSMA3P25788 255 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 STC1P52823 247 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 MYBPC1Q00872 1141 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 CRHR2Q13324 411 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 MRPL58Q14197 206 aaKnown RBP11.36□□□□□ -0.59
C4orf3-201ENST00000399075 FUNDC1Q8IVP5 155 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 PTGR2Q8N8N7 351 aaPredicted RBP11.36□□□□□ -0.59
C4orf3-201ENST00000399075 DGCR14Q96DF8 476 aaKnown RBP11.36□□□□□ -0.59
C4orf3-201ENST00000399075 SPATA17Q96L03 361 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 TRIB3Q96RU7 358 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 ATOH8Q96SQ7 321 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 GPATCH1Q9BRR8 931 aaKnown RBP11.36□□□□□ -0.59
C4orf3-201ENST00000399075 ABCD2Q9UBJ2 740 aa11.36□□□□□ -0.59
C4orf3-201ENST00000399075 RABL2AQ9UBK7 228 aaPredicted RBP11.36□□□□□ -0.59
C4orf3-201ENST00000399075 CRYL1Q9Y2S2 319 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms