RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 DDX3XO00571 662 aaKnown RBP eCLIP11.11□□□□□ -0.63
SRMP1-201ENST00000398959 EFSO43281 561 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 SLC28A2O43868 658 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 ECEL1O95672 775 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 MBD3O95983 291 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 FGF1P05230 155 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 CEACAM5P06731 702 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 KRT10P13645 584 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 CR2P20023 1033 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 AK4P27144 223 aaPredicted RBP11.11□□□□□ -0.63
SRMP1-201ENST00000398959 IL1R2P27930 398 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 SERPINB6P35237 376 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 PRKCIP41743 596 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 MMP13P45452 471 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 CDH6P55285 790 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 MAXP61244 160 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 CDK3Q00526 305 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 B4GALNT1Q00973 533 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 TRAF2Q12933 501 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 SRSF6Q13247 344 aaKnown RBP11.11□□□□□ -0.63
SRMP1-201ENST00000398959 PEX6Q13608 980 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 BOLA3Q53S33 107 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 MARC1Q5VT66 337 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 USP45Q70EL2 814 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 PRICKLE2Q7Z3G6 844 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 HSD11B1LQ7Z5J1 315 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 POLNQ7Z5Q5 900 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 VASH2Q86V25 355 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 ZFAND4Q86XD8 727 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 NRROSQ86YC3 692 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 PGBD5Q8N414 524 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 MGME1Q9BQP7 344 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 FRMD8Q9BZ67 464 aaPredicted RBP11.11□□□□□ -0.63
SRMP1-201ENST00000398959 FAM117AQ9C073 453 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 ZMYND15Q9H091 742 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 ETNK2Q9NVF9 386 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 TRNAU1APQ9NX07 287 aaKnown RBP11.11□□□□□ -0.63
SRMP1-201ENST00000398959 FOXJ2Q9P0K8 574 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 SUFUQ9UMX1 484 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 HEMK1Q9Y5R4 338 aaPredicted RBP11.11□□□□□ -0.63
SRMP1-201ENST00000398959 BSNQ9UPA5 3926 aa11.11□□□□□ -0.63
SRMP1-201ENST00000398959 FLNBO75369 2602 aaKnown RBP11.1□□□□□ -0.63
SRMP1-201ENST00000398959 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 NPIPB15A6NHN6 443 aaPredicted RBP11.1□□□□□ -0.63
SRMP1-201ENST00000398959 PYCARD-AS1I3L0S3 204 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 B4GAT1O43505 415 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 MAFKO60675 156 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 PGLSO95336 258 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 PEX11BO96011 259 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 FUCA1P04066 466 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 ITGB2P05107 769 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 SKILP12757 684 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 TCF4P15884 667 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 CTPS1P17812 591 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 LHCGRP22888 699 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 CD82P27701 267 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 GPR1P46091 355 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 POLD2P49005 469 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 PPM1FP49593 454 aaPredicted RBP11.1□□□□□ -0.63
SRMP1-201ENST00000398959 CTBSQ01459 385 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 ITKQ08881 620 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 NFATC3Q12968 1075 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 PIGHQ14442 188 aaPredicted RBP11.1□□□□□ -0.63
SRMP1-201ENST00000398959 C16orf72Q14CZ0 275 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 RALGPS1Q5JS13 557 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 ARMC12Q5T9G4 340 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 E4F1Q66K89 784 aaPredicted RBP11.1□□□□□ -0.63
SRMP1-201ENST00000398959 DOK6Q6PKX4 331 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 Q6ZVL8 140 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 ZNF438Q7Z4V0 828 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 TSPAN33Q86UF1 283 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 NDUFAF2Q8N183 169 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 RCBTB1Q8NDN9 531 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 EXTL1Q92935 676 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 SCRN2Q96FV2 425 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 CSPG4P5Q96PW8 444 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 NUDT22Q9BRQ3 303 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 CDH19Q9H159 772 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 NT5MQ9NPB1 228 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 CD84Q9UIB8 345 aa11.1□□□□□ -0.63
SRMP1-201ENST00000398959 IGHV5-10-1A0A0J9YXX1 117 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 C9orf172C9J069 976 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 HGSO14964 777 aaPredicted RBP11.09□□□□□ -0.63
SRMP1-201ENST00000398959 IVLP07476 585 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 RARAP10276 462 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 TEAD1P28347 426 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 ADCY8P40145 1251 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 ACTR1BP42025 376 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 GPR3P46089 330 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 EPHB1P54762 984 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 ACTR1AP61163 376 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 KRT81Q14533 505 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 NR1D2Q14995 579 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 CLPPQ16740 277 aaPredicted RBP11.09□□□□□ -0.63
SRMP1-201ENST00000398959 LINC00303Q3SY05 128 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 TDRD12Q587J7 1177 aaKnown RBP11.09□□□□□ -0.63
SRMP1-201ENST00000398959 XKR5Q6UX68 686 aa11.09□□□□□ -0.63
SRMP1-201ENST00000398959 C17orf82Q86X59 251 aaPredicted RBP11.09□□□□□ -0.63
SRMP1-201ENST00000398959 NAGSQ8N159 534 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms